All software
LinkAhead
Open Source Research Data Management Software
- Data
- Electronic Lab Notebook
- ETL
- + 9
- (ANTLR)
- (C++)
- (CSS)
- + 9
Representation of Protein Entities (RoPE)
RoPE clusters related protein structures on torsion angles to derive an interpretable, mathematical conformational space of that protein, revealing relevant protein dynamics.
- C++
- Data analysis
- Data Visualization
- + 4
- C++
- C
- GLSL
- + 4
TetraX
TetraX is a package for finite-element-method (FEM) micromagnetic modeling with the aim of providing user-friendly and versatile micromagnetic workflows. Among other features, it allows to efficiently calculate spin-wave spectra in different magnetic systems of general geometries.
- finite-element-method
- magnetization dynamics
- micromagnetic modeling
- + 4
- Python
- C
- Cython
Oligo Designer Toolsuite
Oligo Designer Toolsuite is a collection of modules that provides all basic functionalities for custom oligo design pipelines as well as advanced experiment-specific functionalities like machine learning models for oligo specificity prediction within a flexible Python framework.
- bioinformatics
- oligonucleotide design
- Probe Design
- + 1
- Python
- Jupyter Notebook
finite-strain-inverse-designed-spinodoids
Data and Code underlying publication: Experiment-informed finite-strain inverse design of spinodal metamaterials
- In situ characterization
- Inverse design
- Machine learning
- + 2
- (Matlab)
- (Other)
- (Python)
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
- Bayesian network models
- Gaussian copula
- Python package
Arena-Crowds
Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.
- Computer networks
- Networks
- Network Science
- ("Jupyter Notebook")
- (Python)
ChASE
ChASE is a modern and scalable library to solve dense Hermitian (Symmetric) algebraic eigenvalue problems based on a spectral polynomial filter. The library is fully parallelized, and is particularly effective for sequences of eigenproblems as they often arise in electronic structure theory.
- C++
- Eigensolver
- GPU
- + 6
- C++
- Cuda
- Fortran
- + 5
DIANNA
Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.
- Explainable AI
- Image processing
- Machine learning
- + 2
- ("Jupyter Notebook")
- (Python)
- (TeX)
Mallob
Automated Reasoning in HPC and Cloud Environments: Scheduling, Solving, Proving
- automated reasoning
- High performance computing
- job scheduling
- + 2
- C++
- Shell
- Python
- + 3
Measurements.jl
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.
- error propagation
- Julia Package
- Physics
- + 1
- (Julia)
Cross-Domain Classification of Moral Values - code
Cross-Domain Classification of Moral Values - code
- Cross-domain
- Ethics
- Morality
- + 3
- (Markdown)
- (Other)
- (Python)