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Logo for SAGECal
@research-software-directory.org

SAGECal

Fast, memory efficient and GPU accelerated radio interferometric calibration program

  • Big data
  • GPU
  • High performance computing
  • (C)
  • (C++)
  • (CMake)
  • + 5
4
216
Logo for FlexiGIS
@helmholtz.software

FlexiGIS

FlexiGIS is a software tool for processing and analysing GIS-based data to design urban energy systems. Models developed with FlexiGIS enable the exploration and assessment of flexibility options in cities.

  • Data analysis
  • Energy
  • Energy planning
  • + 4
  • Python
  • Makefile
2
208
Logo for CellDetection
@helmholtz.software

CellDetection

An open-source Python package, offering advanced AI methods for the identification and segmentation of biomedical objects, such as cells, in image data. Includes trained models that work out-of-the-box for a wide range of use cases.

  • cell counting
  • cell detection
  • cell segmentation
  • + 9
  • Python
  • Dockerfile
1
207
Logo for OpenLB
@research-software-directory.org

OpenLB

OpenLB is a C++ package for the implementation of lattice Boltzmann methods (LBM) to address a vast range of transport problems, e.g. in computational fluid dynamics. The modular open source code enables fast implementation of academic test problems and advanced engineering applications.

  • Computational Fluid Dynamics
  • High Performance Computation
  • Lattice Boltzmann Methods
  • + 4
  • (C)
  • (C++)
  • (Makefile)
  • + 2
26
193
Logo for MS2DeepScore
@research-software-directory.org

MS2DeepScore

Deep learning based similarity measure of mass spectrometry data.

  • ("Jupyter Notebook")
  • (Python)
2
190
@research-software-directory.org

DeepRank GNN

DeepRank-GNN is the graph neural network of our DeepRank package. DeepRank GNN allows to train graph neural networks to classify protein-protein interface

  • Machine learning
  • Protein-Protein Interaction
  • (Python)
2
189
Logo for NNPDF
@research-software-directory.org

NNPDF

Fitting proton substructure to observation data using neural networks

  • Machine learning
  • PDF
  • (C)
  • (CSS)
  • (HTML)
  • + 5
7
188
Logo for SpatialData framework
@helmholtz.software

SpatialData framework

SpatialData is an open and interoperable data framework for ingesting, representing, processing and visualizing spatial omics datasets.

  • Data Visualization
  • FAIR Data
  • Multi omics
  • + 3
  • Python
  • Dockerfile
13
188
Logo for Scalasca
@helmholtz.software

Scalasca

The Scalasca Trace Tools support performance optimization of parallel programs with a collection of highly scalable trace-based tools for in-depth analyses of concurrent behavior, in particular with respect to communication and synchronization, and offers guidance in exploring their causes.

  • hpc
  • Information
  • Performance Analysis
  • + 3
    16
    181
    Logo for GAIA
    @helmholtz.software

    GAIA

    A framework to study the thermo-chemical evolution of rocky and icy bodies (planets, moons, and planetoids) on a global scale in the solar system and beyond.

    • CFD
    • Computational Fluid Dynamics
    • Earth & Environment
    • + 4
      19
      176
      Logo for pycomlink
      @helmholtz.software

      pycomlink

      A python toolbox for deriving rainfall information from commercial microwave link (CML) data.

      • precipitation estimation
      • python
      • rainfall
      • + 2
      • Python
      4
      175
      Logo for GOLEM
      @helmholtz.software

      GOLEM

      GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework

      • Earth & Environment
      • Multiphysics of porous fractured rocks
      • reservoir behaviour and induced seismicity
      • + 1
      • C++
      • SWIG
      • Assembly
      • + 5
      3
      173