All software
OpenChrom
OpenChrom is a vendor independent open source software for chromatography, spectrometry and spectroscopy.
- chromatography
- mass spectrometry
- (CSS)
- (HTML)
- (Java)
- + 1
Spex
Spex is a computer code based on many-body perturbation theory and is part of the FLEUR code family. It uses the full-potential linearized augmented plane-wave method (FLAPW), which provides an accurate basis set for all kinds of materials including transition metals, oxides, and f-electron systems.
SAGECal
Fast, memory efficient and GPU accelerated radio interferometric calibration program
- Big data
- GPU
- High performance computing
- (C)
- (C++)
- (CMake)
- + 5
CellDetection
An open-source Python package, offering advanced AI methods for the identification and segmentation of biomedical objects, such as cells, in image data. Includes trained models that work out-of-the-box for a wide range of use cases.
- cell counting
- cell detection
- cell segmentation
- + 9
- Python
- Dockerfile
FlexiGIS
FlexiGIS is a software tool for processing and analysing GIS-based data to design urban energy systems. Models developed with FlexiGIS enable the exploration and assessment of flexibility options in cities.
- Data analysis
- Energy
- Energy planning
- + 4
- Python
- Makefile
SpatialData framework
SpatialData is an open and interoperable data framework for ingesting, representing, processing and visualizing spatial omics datasets.
- Data Visualization
- FAIR Data
- Multi omics
- + 3
- Python
- Dockerfile
MS2DeepScore
Deep learning based similarity measure of mass spectrometry data.
- ("Jupyter Notebook")
- (Python)
NNPDF
Fitting proton substructure to observation data using neural networks
- Machine learning
- (C)
- (CSS)
- (HTML)
- + 5
OpenLB
OpenLB is a C++ package for the implementation of lattice Boltzmann methods (LBM) to address a vast range of transport problems, e.g. in computational fluid dynamics. The modular open source code enables fast implementation of academic test problems and advanced engineering applications.
- Computational Fluid Dynamics
- High Performance Computation
- Lattice Boltzmann Methods
- + 4
- (C)
- (C++)
- (Makefile)
- + 2
DeepRank GNN
DeepRank-GNN is the graph neural network of our DeepRank package. DeepRank GNN allows to train graph neural networks to classify protein-protein interface
- Machine learning
- Protein-Protein Interaction
- (Python)
Scalasca
The Scalasca Trace Tools support performance optimization of parallel programs with a collection of highly scalable trace-based tools for in-depth analyses of concurrent behavior, in particular with respect to communication and synchronization, and offers guidance in exploring their causes.
- hpc
- Information
- Performance Analysis
- + 3
pycomlink
A python toolbox for deriving rainfall information from commercial microwave link (CML) data.
- precipitation estimation
- python
- rainfall
- + 2
- Python