All software
Overture Maestro
Organizing your distributed data into one index.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- JavaScript
- Makefile
- + 1
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Dockerfile
- Java
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Batchfile
- Dockerfile
- Go
- + 7
Oxygen XML Editor
Oxygen XML Editor is a complete XML development and authoring platform with support for all major XML related standards and technologies.
- cross-platform software
- XML
- XML-Editor
- HTML
- JavaScript
- CSS
- + 1
OxyPOM
OxyPOM: a biogeochemical model for Oxygen and Particulate Organic Matter dynamics with detailed temperature sensitivity
- Biogeochemistry
- Hypoxia
- Phytoplankton viral infection
- + 2
- Fortran Free Form
- R
- Shell
- + 2
PACTE
A Collaborative Electronic Text Annotation Platform
- collaborative
- corpus
- disambiguation
- + 5
PanTools-pipeline-v4
General purpose Snakemake pipeline for PanTools v4.
- Data Analysis
- genomics
- pangenomics
- Dockerfile
- Python
- Shell
paradigma
A toolbox to calculate digital biomarkers for wearable sensors in Parkinson's disease.
- Python
parareal
This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.
- High performance computing
- Numerical analysis
- CSS
- Dhall
- HTML
- + 5
ParFlow
ParFlow is a parallel, integrated hydrology model that simulates spatially distributed surface and subsurface flow.
- Earth System Modelling
- High performance computing
- Hydrology
- + 2
- C
- Tcl
- Python
- + 17
ParticleDA.jl
Julia package to perform data assimilation with particle filters, supporting both thread-based parallelism and distributed processing using MPI.
- Data assimilation
- Julia Package
- Particle filter
- Julia
- Jupyter Notebook
- Shell
ParticlePhaseSpace
A set of tools for processing and analysing particle phase space files. Designed for use with Monte Carlo simulations, particularly for proton therapy.
- Treatment Planning and dosimetry
- Batchfile
- Jupyter Notebook
- Makefile
- + 1