All software
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- ("Common Workflow Language")
- (HTML)
- (Python)
OnkoDICOM
Cross-platform. Provides DVH output, clinical data capture (radiomics), Pyradiomics output, anonymization, ROI manipulation.
- Imaging and Image Processing
- (Python)
Online Transcription Editor (OTE)
Web-based transcription tool
- Transcription
- Transcription Editor
- HTML
- JavaScript
- CSS
- + 2
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- (Batchfile)
- (Brainfuck)
- (C)
- + 23
openFuelCell2
openFuelCell2 is a computational fluid dynamics (CFD) toolbox for simulating electrochemical devices such as fuel cells and electrolysis. The solver is based on the open-source library, OpenFOAM®.
- Electrolyzer
- Energy
- Fuel cells
- + 1
- C
- C++
- Python
- + 2
Open Matrices Stimulus Set (omss)
omss is a Python package for generating matrix reasoning puzzles, inspired by Raven's Progressive Matrices. It allows users to generate an unlimited number of customizable puzzles across a range of difficulty levels by setting rules for visual elements.
- Intelligence
- Matrices
- python
- + 1
- (Python)
openPMD-api
openPMD is an open meta-data schema that provides meaning and self-description for datasets in science and engineering. This library provides a reference API for openPMD data handling, supporting established I/O backends such as HDF5, ADIOS2, JSON and TOML from serial to MPI-parallel workflows.
- ADIOS
- data
- file-format
- + 8
- C++
- Python
- CMake
- + 5
OpenRefine
OpenRefine is a powerful free, open source tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.
- Data Analysis
- Data Science
- (Batchfile)
- (CSS)
- (HTML)
- + 8
OpenREGGUI
Image processing, open-source platform for research in proton therapy
- Treatment Planning and dosimetry
OpenSeadragon
An open-source, web-based viewer for high-resolution zoomable images, implemented in pure JavaScript, for desktop and mobile.
- IIIF
- images
- JavaScript
- HTML
- TypeScript
- + 1
OpenSim Creator
A UI for building OpenSim models
- biomechanical engineering
- opensim
- Simulation
- (AppleScript)
- (C)
- (C++)
- + 2
OpenTPS
OpenTPS is an open-source treatment planning system (TPS) for research in radiation therapy and proton therapy.
- Treatment Planning and dosimetry
- (C)
- (C++)
- (Cuda)
- + 2