All software
dtscalibration
A Python package to load raw Distributed Temperature Sensing (DTS) files, perform a calibration, and plot the result.
- calibration
- DTS
- fiber optic
- + 1
- ("Jupyter Notebook")
- (Python)
Corryvreckan
The Maelstrom for Your Test Beam Data - Corryvreckan is a flexible, fast and lightweight test beam data reconstruction framework based on a modular concept of the reconstruction chain. It is designed to fulfill the requirements for offline event building in complex data-taking environments.
- C++
- Matter
- Testbeam
- + 1
- C++
- CMake
- Python
- + 2
Fastscape Toolbox
Fastscape is a set of open-source software components aimed at making landscape evolution models and topographic analysis algorithms readily accessible to a wide range of users.
- Earth & Environment
- Geomorphology
- landscape
- + 2
- Python
NPLinker Web Application
This is the NPLinker web application, developed with Plotly Dash. It enables interactive visualization of NPLinker predictions and is designed to be run locally or in a containerized environment.
- Data mining
- Genome
- Metabolome
- + 2
- (CSS)
- (Dockerfile)
- (Mustache)
- + 1
PanTools
PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.
- Data Analysis
- Gene classification
- pangenomics
- (Java)
- (Python)
- ("Roff Manpage")
- + 1
Code to paper: Review of image segmentation techniques for the layup defect detection in the Automated Fiber Placement process
Code to paper: Review of image segmentation techniques for the layup defect detection in the Automated Fiber Placement process
- dlr
- fiber placement
- inspection
DataSAIL
DataSAIL is an open-source software tool that splits machine learning datasets while minimizing Information Leakage. It formulates the splitting of a dataset as a constrained minimization problem and optimizes the data split towards an objective function that accounts for information leakage.
- Convex Optimization
- data management
- Data Splitting
- + 3
- Python
- Go Template
- Shell
- + 1
MPI.jl
MPI wrappers for Julia
- HPC
- Julia Package
- MPI
- (Julia)
- (Shell)
QMflows
Construction and efficient execution of computational chemistry workflows.
- Multi-scale & multi model simulations
- Workflow technologies
- ("Jupyter Notebook")
- (Python)
- (Shell)
Vantage6
An open-source platform for supporting the development of federated learning projects
- federated learning
- healthcare
- privacy preserving analysis
- + 1
- (Dockerfile)
- ("Go Template")
- (HTML)
- + 7
cola
Subgroup classification is a basic task in genomic data analysis. The cola package provides a general framework for subgroup classification by consensus partitioning.
- Data analysis
- Data Visualization
- FAIR Data
- + 3
- R
- C++
VarFish
VarFish is a user-friendly web application for the quality control, filtering, prioritization, analysis, and user-based annotation of DNA variant data with a focus on rare disease genetics. It is capable of processing variant call files with single or multiple samples. ...
- Annotation
- Data analysis
- Health
- + 1
- Python
- Vue
- TypeScript
- + 9