All software
OpenPNM
OpenPNM is an open source project aiming to provide porous media researchers with a ready-made framework for performing a wide range of pore network simulations.
- Pore network modeling
- (Makefile)
- (Python)
openPSTD
openPSTD is a Python-based research software that allows efficient and detailed calculation of sound propagation in a 2D built environment. It is especially useful as a reference tool for other developed software on acoustic sound propagation.
- Acoustics
- GPU
- python
- (C)
- (C++)
- (CMake)
- + 3
PAVICS
PAVICS is a virtual laboratory facilitating the analysis of climate data. It provides access to several data collections ranging from observations, climate projections and reanalyses. It also provides a Python programming environment to analyze this data without the need to download it.
- analysis
- climate
- Climate change
- + 5
- (CSS)
- (HTML)
- (JavaScript)
- + 3
PeriHub
PeriHub is a platform that provides a numerical implementation of the peridynamic theory. It is an extension of the open source Peridigm software. Peridynamics is a non-local theory that overcomes discontinuity problems of the classical theory of continuum mechanics.
- Data Visualization
- High performance computing
- Modelling
- + 2
- Python
- Vue
- TypeScript
- + 7
PhenoTips
PhenoTips is a software tool that makes it easy for clinicians and researchers to draw pedigrees and collect structured phenotype data for patients with genetic disorders.
- API
- deep phenotyping
- genogram
- + 6
- (Batchfile)
- (CSS)
- (HTML)
- + 4
pid-component
The pid-component is an easy to use web component that can be used to display PIDs, DOIs, ORCiDs, RORs, and other identifiers in an intuitive way. It is designed to be embeddable in any website and has a small form-factor mode that reduces its height to that of a single line of text.
- Angular
- Data Visualization
- FAIR
- + 19
- TypeScript
- MDX
- Vue
- + 4
Plus Toolkit
Toolkit for data acquisition, pre-processing, calibration, and real-time streaming of imaging, position tracking, and other sensor data for medical applications.
- 3D Slicer
- electromagnetic tracking
- image capture
- + 7
- (Batchfile)
- (C)
- (C++)
- + 2
PoreSpy
PoreSpy is a collection of image analysis tools used to extract information from 3D images of porous materials (typically obtained from X-ray tomography).
- image analysis
- porous media
- tomography
- (Batchfile)
- (Python)
- (Shell)
PostWRF
PostWRF is a bunch of interactive tools, written in NCL and Bash scripts, to visualize and post-process the WRF and ERA5 model outputs.
- NCL
- Shell
- Python
pyGMS
pyGMS: lithosphere-scale rheological analyses of GMS models with Python
- geophysics
- geothermal modeling
- GMS
- + 2
- Python
- Makefile
PyPlaque
PyPlaque is an open-source Python package for automated analysis of virus plaque assays. It quantifies plaque morphology, size, and intensity from plate images, integrates with Python data tools, and enables reproducible, customizable workflows for high-throughput infection biology studies.
- Health
- Image processing
- Omics
- + 1
- Jupyter Notebook
- Python
quark
is a software package to support the mapping of combinatorial optimization problems to quantum computing interfaces via QUBO and Ising problems.
- Discrete Optimization
- Ising Problem
- Quantum Annealing
- + 2
- Python
- Shell