All software
BIRCH
BIRCH is a powerful framework for organizing and using bioinformatics. BIRCH comes with hundreds of commonly-used tools, and allows you to customize your BIRCH site by adding new ones.
- bioinformatics
- BLAST
- genomics
- + 3
BrainBrowser
BrainBrowser is an open source JavaScript library exposing a set of web-based 3D visualization tools primarily targetting neuroimaging
- 3D
- brainbrowser
- neurology
- + 2
- (CSS)
- (HTML)
- (JavaScript)
- + 1
byteparsing
Parser library for reading custom binary files from Python.
- Big data
- Multi-scale & multi model simulations
- Optimized data handling
- (Batchfile)
- (C++)
- (CSS)
- + 5
CBRAIN
CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.
- CBRAIN
- cluster
- Data Analysis
- + 6
- (CSS)
- (HTML)
- (JavaScript)
- + 3
ChemTools
ChemTools is a free and open source Python library for interpreting the results of quantum chemistry calculations.
- atoms in molecules
- conceptual dft
- density matrices kinetic energy density
- + 2
- (Python)
CICMoD - A Climate Index Collection based on Model Data
The software provides a consistent and comprehensive collection of climate indices typically used to describe Earth System dynamics and serves as a new benchmark data set. It allows users to develop new machine learning methods and to compare their results to existing methods in an objective way.
- Earth & Environment
- FAIR Data
- Image processing
- + 1
- Jupyter Notebook
- Python
- Shell
- + 1
cnpy++
cnpy++ is a C++17 library that allows to read and write NumPy data files (.npy and .npz). It is designed in a way to integrate well into the modern C++ ecosystem and it provides features not available in any similar C++/npy library.
- data managment
- C++
- CMake
- C
Cocoda
Web application to create, manage, and review mappings between entities from knowledge organization systems, such as classifications, authority files, ontologies, and thesauri.
- data modeling
- metadata
- open source
- + 1
- Vue
- JavaScript
- Shell
- + 4
CollateX
CollateX is a software to (a.) read multiple versions of a text, (b.) identify differences by aligning tokens, and (c.) output the alignment results for further processing, for instance (d.) to support the production of a critical apparatus or the stemmatical analysis of a text's genesis.
- Critical Edition
- Stemmatology
- Textual Criticism
- HTML
- Java
- Python
- + 8
dCache
dCache is a system for storing and retrieving huge amounts of scientific data, distributed among a large number of heterogeneous server nodes, under a single virtual filesystem tree with a variety of standard access methods including NFSv4.1 (pNFS), FTP, WebDav and xroot.
- data managment
- FAIR Data
- Java
- JavaScript
- HTML
- + 14
dCacheFS
Python file-system interface for dCache storages.
- Data
- Inter-operability & linked data
- Optimized data handling
- + 1
- ("Jupyter Notebook")
- (Python)
Emo-spectre
Interactive visualization and exploration of multi modal time-series data and video
- Visualization
- Workflow technologies
- ("Common Workflow Language")
- (Dockerfile)
- (JavaScript)
- + 5