All software
Minterpy
Minterpy is an open-source Python package for multivariate polynomial interpolation as well as related tasks, like nonlinear polynomial regression, numerical integration, global optimization, level-set methods, and much more.
- Interpolation
- Modeling
- numerical Integration
- Python
mmpxrt
Raytracing code for x-ray spectrometers with (not only) mossaic crystals Helps with design and analysis of x-ray spectrometers. Useful tool for (rather) experienced physicist.
- Python
- CSS
- HTML
- + 2
nnDetection
nnDetection: A Self-configuring Method for Medical Object Detection
- 3d-object-detection
- biomedical image analysis
- Detection
- + 3
- Python
- Cuda
- Dockerfile
- + 3
PSSMGen
Generates consistent PSSM and PDB files for protein-protein complexes
- Big data
- High performance computing
- Optimized data handling
- (Makefile)
- (Python)
PtyLab.m/py/jl
A cross-platform, open-source inverse modeling toolbox for conventional and Fourier ptychography
- computational physics
- Data analysis
- Data Visualization
- + 10
- Jupyter Notebook
- Python
Result Assessment Tool (RAT)
The Result Assessment Tool (RAT) is a free, open-source research toolbox for collecting, analyzing, and evaluating search results.
- computer science
- Data Analysis
- Information Retrieval
- + 6
- (CSS)
- ("Go Template")
- (HTML)
- + 5
rWikiPathways
Use this package to interface with the WikiPathways API. It provides programmatic access to WikiPathways content in multiple data and image formats, including official monthly release files and convenient GMT read/write functions.
- bioinformatics
- WikiPathways
- (HTML)
- (R)
- (TeX)
sv-channels
Genome-wide detection of structural variants using deep learning
- Machine learning
- ("Jupyter Notebook")
- (Python)
- (R)
- + 1
TEITOK
TEITOK is a web-based platform for viewing, creating, and editing corpora with both rich textual mark-up and linguistic annotation.
- PHP
- C++
- JavaScript
- + 2
TulipaEnergyModel
This package provides an optimization model for the electricity market and its coupling with other energy sectors. The objective is to determine the optimal investment and operation decisions for different types of assets.
- Energy system analysis
- Energy system modelling
- Integrated energy systems
- + 4
- (Julia)
- (Python)
- (Ruby)
- + 2
Reference evapotranspiration (FAO-56)
Calculate a daily value of reference evapotranspiration, useful for vegetation (incl. crop) models. The module code is based on FAO-56 Penman-Monteith method.
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- (C)
- (C++)
- (CMake)
- + 5