All software
DeepRank2
DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.
- Cancer vaccine
- Convolutional Neural Network
- Deep Learning Framework
- + 5
- Dockerfile
- Jupyter Notebook
- Python
- + 1
DoE2Vec
DoE2Vec is a self-supervised approach to learn exploratory landscape analysis features from design of experiments. The model can be used for downstream meta-learning tasks such as learninig which optimizer works best on a given optimization landscape.
- Machine learning
- optimization
- python
- Makefile
- Python
- R
laserchicken
Toolkit for preprocessing and feature calculation of point clouds created using airborne laser scanning
- Big data
- Machine learning
- Jupyter Notebook
- Python
LinkAhead
Open Source Research Data Management Software
- Data
- Electronic Lab Notebook
- ETL
- + 9
- ANTLR
- C++
- CSS
- + 9
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
- Bayesian network models
- Gaussian copula
- Python package
Measurements.jl
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.
- error propagation
- Julia Package
- Physics
- + 1
- Julia
TetraX
TetraX is a package for finite-element-method (FEM) micromagnetic modeling with the aim of providing user-friendly and versatile micromagnetic workflows. Among other features, it allows to efficiently calculate spin-wave spectra in different magnetic systems of general geometries.
- finite-element-method
- magnetization dynamics
- micromagnetic modeling
- + 4
- Python
- C
- Cython
Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems
Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems
- Benchmarking
- Blockchain
- Performance
- + 1
- JSON
- Markdown
- Other
- + 3
Cross-Domain Classification of Moral Values - code
Cross-Domain Classification of Moral Values - code
- Cross-domain
- Ethics
- Morality
- + 3
- Markdown
- Other
- Python
perun
perun is a Python package that calculates the energy consumption of Python scripts by sampling usage statistics from hardware interfaces. It can handle MPI applications, gather data from hundreds of nodes, and accumulate it efficiently.
- Earth & Environment
- Energy
- FAIR Software
- + 2
- Python
CHI2025_Plan-then-Execute_LLMAgent
User Interaction Dataset for CHI 2025 paper "Plan-Then-Execute: An Empirical Study of User Trust and Team Performance When Using LLM Agents As A Daily Assistant."
- Daily Assistant
- Human-AI Collaboration
- large language models
- + 2
- CSS
- HTML
- JavaScript
- + 7
PolyR-CNN
Source code for “PolyR-CNN: R-CNN for End-to-End Polygonal Building Outline Extraction”
- aerial imagery
- building footprint extraction
- instance segmentation
- + 4
- Markdown
- Other
- Python
- + 1