All software
CWERNIrevamped
An improved remake of the original CWERNI R- package. This package simulates community wide evolutionary rescue in a neutral community.
- Community ecology
- Community-wide evolutionary rescue
- evolution
- + 3
- (R)
cwltool
The reference implementation of the Common Workflow Language standards
- CommonWL
- CWL
- SciWorkflows
- ("Common Workflow Language")
- (Dockerfile)
- (JavaScript)
- + 4
CWRC-Writer
An in-browser text markup editor for collaborative editing of scholarly projects.
- LOD
- named entity linking
- named entity Recognition
- + 3
- (CSS)
- (HTML)
- (JavaScript)
- + 2
CWRC-Writer
An in-browser text markup editor for use by individual scholars and collaborative scholarly editing projects that require a light-weight online editing environment.
- Web Application
- XML
- XML-Editor
- JavaScript
- CSS
- Less
- + 2
DAMNIT
DAMNIT (Data And Metadata iNspection Interactive Thing) is a tool developed by the Data Analysis group at the European XFEL to provide users with a way to automatically create an overview of their experiment, hopefully replacing the manually-created spreadsheets that are often used.
- Data analysis
- FAIR Data
- metadata
- + 1
- Python
DataDesc
The framework surrounding DataDesc, a metadata schema for software documentation with focus on interfaces, comes with a machine-actionable metadata exchange format and a software toolkit supporting the documentation, extraction and publication of software metadata.
- data managment
- ESD
- FAIR Data
- + 4
- Python
- Shell
- Jupyter Notebook
DataFlow
A comprehensive framework for automated data processing and manual postprocessing, including quality control and flagging. Modular and extensible design allows to create customizable pipelines and monitor their performance throughout the data lifecycle.
- data managment
- Data Visualization
- Pipeline
- + 2
- TSX
- Python
- TypeScript
- + 2
DataLad Container extension
This DataLad extension package equips DataLad's run/rerun functionality with the ability to transparently execute commands in containerized computational environments. On re-run, DataLad will automatically obtain any required container at the correct version prior execution.
- DataLad
- data managment
- Workflow Execution
- Python
- Shell
- Makefile
- + 2
DataLad NEXT extension
This DataLad extension is a staging area for add-ons, for performance upgrades, and user experience improvements. Unlike other topical extensions, the focus is on functionality with broad applicability.
- data distribution
- DataLad
- data management
- Python
- Shell
- Batchfile
- + 2
Data Processing (What Works When for Whom)
Data processing scripts for the project What Works When for Whom
- ("Jupyter Notebook")
- (Python)
- (Shell)
datasalad
A Python library for working with data in the vicinity of Git and git-annex. A focus is efficient communication with subprocesses, which read and produce data in some format.
- DataLad
- git
- git-annex
- + 1
- Python
- Jinja
- Batchfile
DataStream
DataStream is a powerful online platform for sharing information about freshwater health. It is open access and built with communities, policy-makers and researchers in mind.
- Water quality
- watersheds