All software
BrainPrint
Our BrainPrint tools provide shape descriptors of neuroanatomical structures and require a FreeSurfer or FastSurfer segmentation as a pre-processing step. BrainPrint is based on “ShapeDNA” a spectral shape descriptor.
- Data analysis
- MRI
- open source
- + 1
- Python
BornAgain
Software to simulate and fit neutron and x-ray reflectometry and grazing-incidence small-angle scattering. The latter is computed as usual, using the distorted-wave Born approximation, hence the name. Users can set up arbitrary multilayer samples with interface roughness and embedded nanoparticles.
- Data analysis
- Modelling
- Photon and neutron science
- + 1
- C++
- Python
- CMake
- + 2
GrainLearning
Unsure about the parameters of your grains in a computer simulation? Use Iterative Bayesian Filtering to learn parameter distributions from limited data. Is your model running slowly? Speed up your simulations with machine-learning surrogates. All these features are integrated within GrainLearning.
- Bayesian Inference
- Data assimilation
- Machine learning
- + 2
- ("Jupyter Notebook")
- (PureBasic)
- (Python)
- + 1
Scalasca
The Scalasca Trace Tools support performance optimization of parallel programs with a collection of highly scalable trace-based tools for in-depth analyses of concurrent behavior, in particular with respect to communication and synchronization, and offers guidance in exploring their causes.
- hpc
- Information
- Performance Analysis
- + 3
TraP: The LOFAR Transients Pipeline
The LOFAR Transients Pipeline (or "TraP") is a Python and SQL based system for detecting and responding to transient and variable sources in a stream of astronomical images.
- Image processing
- radio astronomy
- Source association
- + 3
- (Mako)
- (PLpgSQL)
- (Python)
- + 1
Kadi4Mat
Kadi4Mat is a generic and open source virtual research environment.
- Aeronautics, Space and Transport
- Earth & Environment
- Electronic Lab Notebook
- + 9
- Python
- Vue
- HTML
- + 2
MAGMa
MAGMa is an online application for the automatic chemical annotation of mass spectrometry data.
- Big data
- Visualization
- (CSS)
- (Cython)
- (Dockerfile)
- + 5
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
- Building
- Point Cloud
- Surface-reconstruction
- + 1
- (Automake)
- (C)
- (C++)
- + 8
Multiphase Code Repository by HZDR for OpenFOAM Foundation Software
This software publication is released by Helmholtz-Zentrum Dresden-Rossendorf according to FAIR principles. It contains experimental research work for the numerical simulation of multiphase flows. The development is based on the open-source software released by the OpenFOAM Foundation.
- Computational Fluid Dynamics
- Energy
- Euler-Euler method
- + 5
Matlab codes for Probabilistic Field Approach for Motorway Driving Risk Assessment
Matlab codes for Probabilistic Field Approach for Motorway Driving Risk Assessment
- automated driving
- Collision probability
- Reachability analysis
- + 1
alpaka
The alpaka library is a header-only C++17 abstraction framework designed for computing accelerator development. It enables developers to implement algorithms once and execute them across a range of platforms, including x86, ARM, and RISC-V CPUs, as well as accelerators from NVIDIA, AMD, and Intel.
- C++
- CPU
- CUDA
- + 7
- C++
- CMake
- Shell
- + 1
R package for WALRUS (Wageningen Lowland Runoff Simulator)
R package for WALRUS (Wageningen Lowland Runoff Simulator)
- discharge simulation
- hydrological model
- hydrology
- + 4