All software
rcrisp Shiny app
Shiny web app for the rcrisp software package.
- geospatial
- R
- shiny
- + 1
- R
Remote BMI
Remote BMI allows you to communicate with Basic Model Interface enabled numerical models using a RESTful API
- Basic Model Interface
- BMI
- julia
- + 4
- Julia
- Python
- R
- + 3
ReStore
ReStore for MPI programs enables scalable in-memory recovery of data after process failures via an appropriate data distribution and replication. It supports shrinking and replacing recovery-schemes and is substantially faster than parallel file system based approaches.
- Distributed Memory Algorithms
- Fault-Tolerance
- High performance computing
- C++
- R
- CMake
- + 2
ROOT
An open-source data analysis framework used by high energy physics and others.
- C++
- C
- JavaScript
- + 27
rspacer
rspacer is an R package that wraps the RSpace Electronic Lab Notebook (https://www.researchspace.com/) API. It provides convenience functions to browse, search, create, and edit your RSpace documents. In addition, it enables filling RSpace templates using R Markdown/Quarto reports or tabular data.
- Electronic Lab Notebook
- FAIR
- research data management
- + 1
- HTML
- R
scPower
scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.
- Experimental design
- Health
- scRNA-seq
- + 1
- R
- HTML
- CSS
seahtrue
Seahtrue processes XF analyzer data on oxygen consumption and acidification from Agilent Wave .xlsx exports into tidy, nested tibbles, enabling reproducible analysis, preprocessing checks, advanced visualisation, and statistics for open metabolic research.
- bioconductor
- metabolism
- R
- + 2
- R
SERGHEI
The Simulation EnviRonment for Geomorphology, Hydrodynamics and Ecohydrology in Integrated form (SERGHEI) is a multi-dimensional, multi-domain, and multi-physics model framework for environmental and landscape simulation, intended to simulate water flow and transport across landscape scales.
- Earth & Environment
- GPU
- High performance computing
- + 4
- C++
- CMake
- Shell
- + 2
StratPal
R package for modeling pipelines in stratigraphic paleobiology
- Palaeontology
- Paleobiology
- Paleontology
- + 2
- R
visor
The goal of visor is to provide a set of tools for visibility analysis.
- geospatial
- gis
- isovist
- + 1
- R
VoltRon
VoltRon is a spatial omic analysis toolbox for multi-omics integration using spatial image registration. VoltRon is also capable of analyzing multiple types of spatially-aware data modalities.
- Genomics
- spatial omics
- R
- C++
- Dockerfile
- + 2