All software

PHYLIP

PHYLIP is a free package of programs for inferring phylogenies. It is distributed as source code, documentation files, and a number of different types of executables.

PiGx

PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.

Pundit

Web annotation made easy With Pundit Annotator you can highlight or comment on any text on the web. It is the perfect tool for your work, research, study. Pundit Annotator also helps you broaden your everyday reading on the web.

Pyrrha

Pyrrha is a simple Python Flask WebApp to fasten the post-correction of lemmatized and morpho-syntactic tagged corpora.

Research Software Directory

The Research Software Directory is a content management system that is tailored to research software.

RO Crate Java

A Java library to create and modify RO-Crates. The aim of this implementation is to not require too deep knowledge of the specification, and avoiding crates which do not fully comply to the specification, at the same time.

SampleDB

SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.

scPower

scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.

SMECS _ software metadata extraction and curation software

A web application to extract and curate research software metadata following the CodeMeta software metadata standard.

SNIK Graph

spatial.IO

An integrated cloud-ready geospatial data management system.

spirit

Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.