All software
ProFASi
PROFASI (PROtein Folding and Aggregation SImulator) is a C++ package for HPC Monte Carlo simulations of protein folding and aggregation. It provides an all atom, implicit solvent force field, and a set of tools to perform Monte Carlo simulations. A plugin mechanism allows for user extensions.
- Monte Carlo
- Peptide Aggregation
- Protein folding
- + 2
- C++
- CMake
- Python
- + 1
PyTango
PyTango is a python module that exposes to Python the complete Tango C++ API. This means that you can write not only Tango applications (scripts, CLIs, GUIs) that access Tango device servers but also Tango device servers themselves, all of this in pure python.
- Controled Experiments
- DCS - Distributed Control System
- Motor Control
- + 2
- Python
- C++
- CMake
- + 2
ReStore
ReStore for MPI programs enables scalable in-memory recovery of data after process failures via an appropriate data distribution and replication. It supports shrinking and replacing recovery-schemes and is substantially faster than parallel file system based approaches.
- Distributed Memory Algorithms
- Fault-Tolerance
- High performance computing
- C++
- R
- CMake
- + 2
SERGHEI
The Simulation EnviRonment for Geomorphology, Hydrodynamics and Ecohydrology in Integrated form (SERGHEI) is a multi-dimensional, multi-domain, and multi-physics model framework for environmental and landscape simulation, intended to simulate water flow and transport across landscape scales.
- Earth & Environment
- GPU
- High performance computing
- + 4
- C++
- Shell
- CMake
- + 2
SMASH - A hadronic transport approach
SMASH is a relativistic hadronic transport approach for the dynamical description of heavy-ion reactions. It is a microscopic non-equilibrium approach and incorporates all well known hadronic states and their interactions.
- CPU
- Matter
- open source
- + 1
- C++
- CMake
- Shell
- + 3
spirit
Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.
- Atomistic Spin Dynamics
- C++
- CUDA
- + 5
- C++
- Python
- CMake
- + 9
Steca - the stress and texture calculator
Data reduction software for materials diffraction
- Data reduction
- Photon and neutron science
- Visualization
- C++
- PostScript
- CMake
- + 2
TiXI
TiXI is a fast and simple XML interface library and could be used from applications written in C, C++, Fortran, JAVA and Python.
- xml
- C++
- C
- Python
- + 6
Tomato Tools
The Tomato Tools are a collection of graphical user interface applications related to the Acquisition, Curation and Management Workflow of marine image data. The tools can be used as standalone applications or, using the Tomato Launcher, in conjunction to form whole workflows.
- C++
- data managment
- FAIR Data
- + 2
- C++
- CMake
- Batchfile
- + 1
TSMP
The Terrestrial Systems Modelling Platform (TSMP) is an open source framework implementing a scale-consistent, highly modular, massively parallel regional Earth system model. It represents transport and feedback processes of mass, energy and momentum across geo-ecosystem compartments and scales.
- Earth & Environment
- Fortran
- Shell
- C
- + 10
VoltRon
VoltRon is a spatial omic analysis toolbox for multi-omics integration using spatial image registration. VoltRon is also capable of analyzing multiple types of spatially-aware data modalities.
- Genomics
- spatial omics
- R
- C++
- Dockerfile
- + 2