All software
py-cordex
py-cordex is a Python library for managing CORDEX grids, handling rotated/projection-based domains, and supporting CMORization of regional climate data. It enables compliant metadata, grid generation, and integration with xarray for climate workflows.
- CORDEX
- Earth & Environment
- python
- Python
- Makefile
Pydicer
Eases conversion of Radiotherapy DICOM data to research-ready format (NIfTI). Provides analysis functionality.
- Imaging and Image Processing
- Makefile
- Python
- Shell
pydicom
Reads, modifies, and writes DICOM data in a "pythonic" way. General-purpose framework, does not handle specifics of individual SOP classes.
- Software Engineering and Data Infrastructure
- Makefile
- Python
- Shell
PyELSEPA
Python wrapper for ELSEPA, a numeric code for computing elastic scattering cross-sections for electrons and positrons off neutral atoms.
- Dockerfile
- Python
pyESAPI
A Python wrapper for the Varian Eclipse Scripting API (ESAPI). Allows scripting of Eclipse functions using Python.
- Software Engineering and Data Infrastructure
- PowerShell
- Python
Py-HLA-Match
Py-HLA-Match is a Python library for standardised, rule-based HLA (Human Leukocyte Antigen) matching in retrospective analyses, method development, benchmarking, and in silico studies in immunogenetics and related fields.
- antigen recognition domain
- ARD
- HLA
- + 10
- Python
Pylinac
Pylinac provides TG-142 quality assurance (QA) tools to Python programmers in the field of therapy and diagnostic medical physics.
- Imaging and Image Processing
- Python
- Shell
pymcc
Module that reads PTW mephisto mcc files from watertank scans or array files. pymcc relies on Pandas and uses a Pandas DataFrame to store the measurement values within the class objects.
- Treatment Planning and dosimetry
- Python
PyMedPhys
PyMedPhys is an open-source Medical Physics Python library built by an open community that values code sharing, review, improvement, and learning from each other.
- Quality Assurance
- Python
- TeX
pynetdicom
A Python library for DICOM network communication. Implements the DICOM network protocol to allow sending and receiving DICOM files.
- Software Engineering and Data Infrastructure
- Python
- Shell
pyOrthanc
PyOrthanc makes it easy to work with DICOM medical images stored on Orthanc servers using Python - instead of dealing with the DICOM protocol directly or creating complex code to interact with Orthanc's REST API.
- Software Engineering and Data Infrastructure
- Dockerfile
- Python
pyPDAF
pyPDAF provides the functionality to use the Parallel Data Assimilation Framework (PDAF) fully in Python. One can use all functionality of PDAF while implementing the case-specific code for the chosen data assimilation application in Python.
- Atmospheric science
- Bayesian inference
- data assimilation
- + 8
- Cython
- Python
- Fortran
- + 4