All software
PP
Pixel-Patrol
- Data exploration
- Prevalidation
- QC
- + 1
- Jupyter Notebook
- Python
- JavaScript
- + 3
prfmodel
A modern Python implementation for population receptive field modelling.
- GPU
- neuroimaging
- Neuroscience
- + 2
- Python
ProFASi
PROFASI (PROtein Folding and Aggregation SImulator) is a C++ package for HPC Monte Carlo simulations of protein folding and aggregation. It provides an all atom, implicit solvent force field, and a set of tools to perform Monte Carlo simulations. A plugin mechanism allows for user extensions.
- Monte Carlo
- Peptide Aggregation
- Protein folding
- + 2
- C++
- CMake
- Python
- + 1
protein-detective
Python package to detect proteins in EM density maps.
- Python
PSRDADA python
If you want to do astrophysics in python, this could come in handy. Connect to a radiotelescope and process data in real-time.
- Cython
- Makefile
- Python
pyanno4RT
pyanno4rt is a Python package for conventional and outcome prediction model-based inverse photon and proton treatment plan optimization, including radiobiological and machine learning (ML) models for tumor control probability (TCP) and normal tissue complication probability (NTCP).
- Treatment Planning and dosimetry
- Python
pybacting
Python wrapper around Bacting.
- Biology
- Chemistry
- python
- Just
- Python
PyBeam-QA
A Python library for performing beam quality assurance tests in radiotherapy. The software is in an early stage of development.
- Quality Assurance
- HTML
- JavaScript
- Python
- + 1
PyCast S2S
PyCast S2S is a collection of tools for post-processing climate forecasts. It is tailored towards the integration in operational workflows, allowing for automated bias-correction and forecast evaluation. PyCast is written in Python and uses state-of-the-art libraries for data processing.
- Climate forecasting
- Earth & Environment
- open source
- + 1
- Jupyter Notebook
- Python
pyCERR
pyCERR provides convenient data structure for imaging metadata and their associations. Utilities are provided to to extract, transform, organize metadata and visualize results of image processing for image and dosimetry features, image processing for AI model training and inference.
- Treatment Planning and dosimetry
- Jupyter Notebook
- Python
- Shell
pycmor
A Python package that simplifies the conversion of climate model output into CMOR-compliant formats, supporting CMIP6 and CMIP7 standards. Provides a modular, plugin-based pipeline for processing NetCDF data from diverse Earth system models.
- CF-conventions
- climate model output
- CMIP6
- + 7
- Python
Pycoeus
Pycoeus is a command-line tool and python package designed for exploration of multiband geospatial datasets. It lets the user iteratively train and retrain segmentation models in seconds. A combination of Deep learning and traditional machine learning is used, leveraging the best of both methods.
- deep learning
- gis
- Machine learning
- + 2
- Python