All software
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- C
- C++
- CMake
- + 6
Code and data supporting the publication: ZIMFLUX: Single molecule localization microscopy with patterned illumination in 3D
Code and data supporting the publication: ZIMFLUX: Single molecule localization microscopy with patterned illumination in 3D
- modulated excitation
- SMLM
- Super-Resolution Microscopy
- + 2
- C
- C#
- C++
- + 7
RoIPoly
Source code for “RoIPoly: Vectorized Building Outline Extraction Using Vertex and Logit Embeddings”
- aerial imagery
- building footprint extraction
- instance segmentation
- + 4
- C
- C++
- Markdown
- + 4
MagnumPI - Potential Integrator
A package for the calculation of scattering angles and cross sections.
- Inter-operability & linked data
- Visualization
- C++
- CMake
- M4Sugar
- + 2
PowerSensor3
PowerSensor is a low-cost, custom-built device that measures the instantaneous power consumption of GPUs and other devices at a high time resolution.
- GPU
- High performance computing
- C
- C++
- CMake
- + 3
mason_constitutive_model
MASON (Masonry Advanced Softening cONtact) source code
- cyclicity
- distinct element method
- explicit integration scheme
- + 3
- C
- C++
- Markdown
- + 1
eAstroViz
This tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR intermediate data products. It also performs RFI mitigation.
- LOFAR
- radio astronomy
- RFI
- C
- C++
- Cuda
- + 3
LUE
LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.
- Agent-based modeling
- environmental modelling
- field based modelling
- + 6
- Batchfile
- C
- C++
- + 6
SicHash
A perfect hash function is a function that has no collisions on a given set. SicHash places objects in a cuckoo hash table and then stores the final hash function choice of each object in a retrieval data structure. Using irregular cuckoo hashing, each object has a different number of hash functions
- C++
- TeX
- Shell
- + 2
13CFLUX
13CFLUX - third-generation, high-performance simulation engine for isotopically stationary and non-stationary 13C metabolic flux analysis within an open, extensible software ecosystem.
- Biotechnology
- Fluxomics
- Isotope labeling
- + 6
- C++
- Python
- CMake
- + 2
Entangled
Entangled makes literate programming easier. It keeps markdown and program source in sync. This makes it more convenient to extend and debug your literate code.
- Literate Programming
- open science
- python
- + 2
- C
- C++
- Jinja
- + 3
ShockHash
A perfect hash function is a function that has no collisions on a given set. ShockHash constructs very compact perfect hash functions significantly faster than previous approaches.
- C++
- CMake
- Shell