All software
Manicule
Manicule is a standalone React/Redux web application for presenting unique printed books and manuscripts in digital facsimile.
- annotation
- digital facsimile
- TypeScript
- CSS
- HTML
- + 1
Molstar chat
Chat extension for Mol* protein visualizer
- HTML
- JavaScript
- SCSS
- + 1
mytoken
Mytoken is a web service to obtain OpenID Connect Access Tokens in an easy but secure way for extended periods of time and across multiple devices. In particular, mytoken was developed to provide OIDC Access Tokens to long-running compute jobs.
- AAI
- Helmholtz AAI
- OIDC
- + 2
- Go
- Svelte
- TypeScript
- + 5
NanopubJL
JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook
- Inter-operability & linked data
- CSS
- Dockerfile
- JavaScript
- + 3
NeXusCreator
Python CLI & API for converting heterogeneous experimental data into validated NeXus (HDF5) files using reusable mapping templates and extensible workflows.
- Python
- Jupyter Notebook
- Svelte
- + 2
NovaCrate
Web-based interactive editor for creating, editing and visualizing research object crates.
- browser
- crate
- edit
- + 14
- TypeScript
- CSS
- JavaScript
- + 1
OBiBa Agate
Agate is a web application that offers users related services to the OBiBa software stack.
- authentication
- Epidemiology
- Batchfile
- Fluent
- FreeMarker
- + 8
OBiBa Opal
Opal is OBiBa's core data repository application for epidemiological studies.
- euCanSHare, software integration
- ANTLR
- Batchfile
- HTML
- + 8
OpenSeadragon
An open-source, web-based viewer for high-resolution zoomable images, implemented in pure JavaScript, for desktop and mobile.
- IIIF
- images
- JavaScript
- HTML
- TypeScript
- + 1
Overture Arranger
Data can be messy, let Arranger organize it for you.
- CSS
- HTML
- JavaScript
- + 3
Overture Maestro
Organizing your distributed data into one index.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- JavaScript
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Batchfile
- Dockerfile
- Go
- + 7