All software
duckdb-mmcif
Read/write protein structure mmCIF files using SQL with DuckDB
- Data
- Data Analysis
- Optimized data handling
- C++
- CMake
- Makefile
- + 2
DumME
Scikit-learn compatible version of Mixed-Effects Random Forests
- Python
DVH-analytics
Public archive, no longer supported as of Feb 2, 2022. Designed for building local database of radiation oncology treatment planning data.
- Software Engineering and Data Infrastructure
- Python
e2e-Dutch
Coreference resolution for Dutch: automatically links references to the same entity in Dutch written texts.
- Machine learning
- Text analysis & natural language processing
- C++
- Python
- Shell
Earthquake Explorer
Up-to-date information and essential background knowledge about earthquakes. Users can access, explore, and analyze earthquake data from around the world by the Earthquake Explorer in a mobile optimized modern web platform.
- Earth & Environment
- Information
- python
- Python
- JavaScript
- HTML
- + 2
easyWave
easyWave-GPU computes tsunami wave propagations in a fraction of minute on GPU-powered machines. Thus , a single simulation, or several simulations with varying granularity, covering several hours of tsunami wave propagation, and tailored to the actual situation can be computed within seconds.
- early warning
- Earth & Environment
- tsunami forecasting
- C++
- Cuda
- Python
- + 2
EcoToxFred
EcoToxFred (ETF) is a digital domain expert that enables simple, natural-language access to complex, integrated ecotoxicological data. It combines knowledge graphs, large language models, and agent-based workflows to support intuitive exploration and analysis of environmental risk information.
- Conversational AI
- Environmental Toxicology
- knowledge graph
- + 2
- Python
- Cypher
- Dockerfile
eEcology-SMS-reciever
If you have birds flying around carrying UvA-BiTS trackers, then this software can save the SMS messages containing the bird's last known positions which are sent by the tracker to the UvA Bird tracking system's central database.
- Real time data analysis
- Dockerfile
- Mako
- Perl
- + 1
EEG_age_prediction
Deep learning for age prediction using EEG data
- deep learning
- EEG Signal
- Time Series
- Jupyter Notebook
- Python
- Shell
Effort Sharing
Analysis and plotting scripts for effort sharing, associated with the Carbon Budget Explorer
- Jupyter Notebook
- Python
eGSIM
A Python library and web application to select and test Ground Motion models. Online at: https://egsim.gfz-potsdam.de
- Flatfile
- Geohazards
- Ground motion model
- + 1
- Python
- JavaScript
- HTML
- + 2
eitprocessing
eitprocessing is an open source collaborative python library for the processing and analysis of electrical impedance tomography for clinical use.
- Electrical impedance tomography
- Image processing
- python
- Dockerfile
- Jupyter Notebook
- Python