All software
Representation of Protein Entities (RoPE)
RoPE clusters related protein structures on torsion angles to derive an interpretable, mathematical conformational space of that protein, revealing relevant protein dynamics.
- C++
- Data analysis
- Data Visualization
- + 4
- C++
- C
- GLSL
- + 4
Stable-Baselines3
Stable Baselines3 (SB3) is a set of reliable implementations of reinforcement learning algorithms in PyTorch.
- Machine learning
- robotics
- Python
- Shell
- Makefile
- + 1
pySDC
pySDC is a Python implementation of the spectral deferred correction approach and its flavors, esp. the parallel-in-time extension PFASST. It is intended for rapid prototyping and educational purposes. New ideas can be tested and first toy problems can be easily implemented.
- collocation
- high-performance computing
- Information
- + 4
- Python
- Jupyter Notebook
- C++
- + 2
CosmoScout VR
CosmoScout VR is an open source virtual Solar System, primarily aimed at interactive visualization of huge remote sensing products in conjunction with large-scale simulation data.
- Aeronautics, Space and Transport
- Data Visualization
- solar system
- + 1
- C++
- GLSL
- JavaScript
- + 7
HoloWizard
HoloWizard is a software to reconstruct near-field holograms form x-ray microscopy experiments and other sources.
- Near-field holography
- Phase problem
- Phase retrieval
- + 2
- Python
- HTML
- Shell
AiiDA-KKR
This AiiDA plugin provides high-throughput automation and FAIR data management for the Jülich KKR codes.
- Data Visualization
- FAIR Data
- Information
- + 4
- Python
- Shell
- OpenEdge ABL
KaMinPar
Shared-Memory and Distributed-Memory Graph Partitioning
- Data analysis
- Graphs
- High performance computing
- + 3
- C++
- CMake
- Python
- + 4
deploy2zenodo
deploy2zenodo is a script to deploy your data to zenodo. You can use it in a CI pipeline as an automatic workflow. Environmental variables allow very flexible use. Depending on the flags, the data can be curated before deployment in a merge request, in the zenodo web interface or not curated at all.
- automatic workflow
- CI pipeline
- deploy
- + 7
- Shell
SUMO
Eclipse SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation.
- Aeronautics, Space and Transport
- Modelling
- open source
- + 2
- Python
- C++
- C
- + 14
CUAS-MPI
CUAS-MPI is the MPI-parallel implementation of the confined-unconfined aquifer system model for subglacial hydrology. The model uses a single-layer equivalent porous medium approach and solves a two-dimensional Darcy-type groundwater flow equation.
- C++
- Earth & Environment
- FAIR Software
- + 4
- C++
- CMake
- C
- + 1
Flow-Alert
A machine-learning and seismic data–driven model for early warning of channelized flows.
- debris (channelized) flows
- early warning
- event detection
- + 3
- Python
- Shell
cuBNM
A toolbox for efficient simulation of brain biophysical network models on GPUs
- Biophysical network modeling
- Brain Simulation
- GPU
- + 3
- C
- Python
- C++
- + 4