All software
pySDC
pySDC is a Python implementation of the spectral deferred correction approach and its flavors, esp. the parallel-in-time extension PFASST. It is intended for rapid prototyping and educational purposes. New ideas can be tested and first toy problems can be easily implemented.
- collocation
- high-performance computing
- Information
- + 4
- Python
- Jupyter Notebook
- C++
- + 2
MapReader
MapReader is an end-to-end computer vision (CV) pipeline for exploring and analyzing images at scale.
- computer vision
- digital humanities
- geospatial
- + 4
- Dockerfile
- Python
- Shell
- + 1
pbg-ld
Access integrated data on genes and associated traits in plants
- Data Analysis
- genomics
- Inter-operability & linked data
- Dockerfile
- Makefile
- PLpgSQL
- + 2
Reflectorch
Reflectorch is a Python package for the analysis of X-ray and neutron reflectivity data using Pytorch-based neural networks. It provides fast simulation of reflectometry curves by GPU, parameterization via YAML configuration files, and prior-aware training.
- Machine learning
- neutron
- open source
- + 3
- Python
- TeX
- Dockerfile
cuBNM
A toolbox for efficient simulation of brain biophysical network models on GPUs
- Biophysical network modeling
- Brain Simulation
- GPU
- + 3
- C
- Python
- C++
- + 4
gammalearn
Deep Learning for Imaging Cherenkov Telescopes Data Analysis
- cta
- deep learning
- Gamma-ray telescopes
- + 1
- Dockerfile
- Python
PeriLab
PeriLab is a Software to solve Peridynamic problems. It is written in Julia to overcome many issues related to the Software Peridigm.
- High performance computing
- julialang
- Peridynamics
- + 1
- Julia
- G-code
- Python
- + 4
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- CSS
- Dockerfile
- HTML
- + 5
Virtual Human Platform
The Virtual Human Platform (VHP) was developed through the VHP4Safety project to support chemical and pharmaceutical safety testing. VHP provides you with human-relevant tools and models for precision safety evaluation, helping you reduce reliance on laboratory animals.
- toxicology
- CSS
- Dockerfile
- HTML
- + 4
Kaapana
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.
- data managment
- Federated Learning
- Image processing
- + 2
- Python
- Vue
- TypeScript
- + 14
Turing Data Safe Haven
Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.
- Cloud
- cloud storage
- Infrastructure as code
- + 3
- Dockerfile
- Jinja
- PLpgSQL
- + 4
Xenon command line interface
A command line interface for the Xenon library that allows you to use remote machines to do your computations.
- High performance computing
- Batchfile
- Common Workflow Language
- Dockerfile
- + 2