All software
ChASE
ChASE is a modern and scalable library to solve dense Hermitian (Symmetric) algebraic eigenvalue problems based on a spectral polynomial filter. The library is fully parallelized, and is particularly effective for sequences of eigenproblems as they often arise in electronic structure theory.
- C++
- Eigensolver
- GPU
- + 6
- C++
- Cuda
- CMake
- + 6
MUSCLE3
MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.
- High performance computing
- Multi-scale & multi model simulations
- C
- C++
- Dockerfile
- + 4
OMUSE
A Python environment to interface and couple oceanographic and other earth system model codes.
- High performance computing
- Multi-scale & multi model simulations
- Batchfile
- C
- C++
- + 10
Representation of Protein Entities (RoPE)
RoPE clusters related protein structures on torsion angles to derive an interpretable, mathematical conformational space of that protein, revealing relevant protein dynamics.
- C++
- Data analysis
- Data Visualization
- + 4
- C++
- C
- GLSL
- + 4
LinkAhead
Open Source Research Data Management Software
- Data
- Electronic Lab Notebook
- ETL
- + 9
- ANTLR
- C++
- CSS
- + 9
ReconUS
ReconUS v1.0 - Matlab toolbox for 2D, 3D and multi-probe ultrasound simulation, reconstruction and signal processing.
- 2d reconstructions
- 3D reconstruction
- Beamforming
- + 4
- C++
- JSON
- Markdown
- + 2
CUAS-MPI
CUAS-MPI is the MPI-parallel implementation of the confined-unconfined aquifer system model for subglacial hydrology. The model uses a single-layer equivalent porous medium approach and solves a two-dimensional Darcy-type groundwater flow equation.
- C++
- Earth & Environment
- FAIR Software
- + 4
- C++
- CMake
- C
- + 1
pySDC
pySDC is a Python implementation of the spectral deferred correction approach and its flavors, esp. the parallel-in-time extension PFASST. It is intended for rapid prototyping and educational purposes. New ideas can be tested and first toy problems can be easily implemented.
- collocation
- high-performance computing
- Information
- + 4
- Python
- Jupyter Notebook
- C++
- + 2
CosmoScout VR
CosmoScout VR is an open source virtual Solar System, primarily aimed at interactive visualization of huge remote sensing products in conjunction with large-scale simulation data.
- Aeronautics, Space and Transport
- Data Visualization
- solar system
- + 1
- C++
- GLSL
- JavaScript
- + 7
KaMinPar
Shared-Memory and Distributed-Memory Graph Partitioning
- Data analysis
- Graphs
- High performance computing
- + 3
- C++
- CMake
- Python
- + 4
KaMPIng - Karlsruhe MPI next generation
KaMPIng is a flexible and (near) zero-overhead C++ wrapper for MPI, covering the whole range of abstraction levels from low-level MPI calls to convenient STL-style bindings. This allows for both rapid prototyping and highly engineered distributed algorithms.
- C++
- High performance computing
- MPI
- + 1
- C++
- CMake
- Shell
- + 1
Elephant
Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language.
- data-analysis
- electrophysiology
- neurophysiology
- + 2
- Python
- C++
- Cuda
- + 1