All software
Elephant
Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language.
- data-analysis
- electrophysiology
- neurophysiology
- + 2
- Python
- C++
- Cuda
- + 1
cuBNM
A toolbox for efficient simulation of brain biophysical network models on GPUs
- Biophysical network modeling
- Brain Simulation
- GPU
- + 3
- C
- Python
- C++
- + 4
simona
This package implements infrastructures for ontology analysis by offering efficient data structures, fast ontology traversal methods, and elegant visualizations. It provides a robust toolbox supporting over 70 methods for semantic similarity analysis.
- Data analysis
- Data Visualization
- FAIR Data
- + 3
- R
- C++
- JavaScript
- + 3
DALES
DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.
- C
- CMake
- Fortran
- + 8
ExploreASL
ExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.
- ASL
- Image processing
- MRI
- C
- MATLAB
- Python
FastMLC
Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.
- Big data
- Machine learning
- Visualization
- C
- C++
- CMake
- + 5
Code and data underlying the publication: Symmetrization of 2D Polygonal Shapes Using Mixed-Integer Programming
Code and data underlying the publication: Symmetrization of 2D Polygonal Shapes Using Mixed-Integer Programming
- Design
- Digitalization
- Shape optimization
- + 1
- Automake
- C
- C++
- + 3
Uncertainty Specification and Analysis for Thermosphere Observations
Uncertainty Specification and Analysis for Thermosphere Observations
- Accelerometer
- GNSS tracking
- Mass density
- + 2
- C
- C++
- Fortran
- + 3
RoIPoly
Source code for “RoIPoly: Vectorized Building Outline Extraction Using Vertex and Logit Embeddings”
- aerial imagery
- building footprint extraction
- instance segmentation
- + 4
- C
- C++
- Markdown
- + 4
FairMQ
FairMQ is designed to help implement large-scale data processing workflows needed in next-generation particle physics experiments.
- framework
- Matter
- workflow library
- C++
- CMake
- C
- + 2
GMGPolar
GMGPolar is a geometric multigrid solver using implicit extrapolation to raise the convergence order. It is based on meshes in tensor- or product-format. GMGPolar's focus applications are geometries that can be described by polar or curvilinear coordinates for which suited smoothing is available.
- Energy
- Geometric Multigrid
- High performance computing
- + 5
- C++
- Python
- Shell
- + 3
t8code
t8code (spoken as "tetcode") is a C/C++ library to manage parallel adaptive meshes with various element types. t8code uses a collection (a forest) of multiple connected adaptive space-trees in parallel and scales to at least one million MPI ranks and over 1 trillion mesh elements.
- data managment
- Data Visualization
- exascale
- + 3
- C++
- C
- CMake
- + 3