All software
supersonic-effects
A Python package to model ozone column changes and radiative effects in response to various aircraft emissions at different altitudes over specific regions. The model combines empirical emission sensitivities to estimate effects of supersonic transport on ozone and radiation.
- aircraft
- Earth & Environment
- Earth System Modelling
- + 4
- Python
swiftmhc
SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.
- deep learning
- Protein-Protein Interaction
- Transformer
- Python
- Jupyter Notebook
- Mask
- + 1
TaxoTagger
DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Python
- Makefile
- Mustache
Tesseract OCR
Tesseract ist eine Software zur Texterkennung. Mehr als 100 Sprachen und Sprachvarianten werden unterstützt, zudem verschiedene Schriften / Schriftsysteme: lateinische Antiqua, Fraktur, Devanagari (indische Schrift), chinesische, arabische, griechische, hebräische, kyrillische Schrift.
- OCR
Trimmomatic
Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.
- Earth & Environment
- Illumina
- NGS
- Java
- Dockerfile
TrixiParticles.jl
Particle-based multiphysics simulations in Julia
- CFD
- Earth & Environment
- Information
- + 2
- Julia
Umple
Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort
- Code Generation
- Software Modeling
- State Machines
- + 1
- Java
- JavaScript
- GAP
- + 17
UrMoAC
UrMoAC is a tool for computing accessibility measures, supporting aggregation, variable limits, and intermodality.
- accessibility measures
- land-use indicators
- Java
- Python
- Batchfile
ValidSense
The ValidSense toolbox aims to assess the agreement between two quantitative methods using the Limits of Agreement analysis, aka the Bland-Altman analysis. Four existing variants are available. Moreover, a Longitudinal analysis is developed to assess agreement over time.
- Agreement Analysis
- Bland-Altman
- Limits of Agreement
- + 1
- Python
VASCA
The VAriable Source Cluster Analysis (VASCA) is an astronomy pipeline for time-variable sources.
- Astronomy
- catalogue
- Data analysis
- + 6
- Jupyter Notebook
- Python
WAM2layers
WAM2layers is an atmospheric moisture-tracking model that can be used to determine where precipitation originally evaporated (backtracking), or where evaporated moisture eventually ends up (forward tracking).
- atmospheric rivers
- ERA5
- hydrological cycle
- + 4
- Python
- Jupyter Notebook
- Shell
WESkit
An implementation of the Workflow Execution Service API of the Global Alliance for Genomic Health (GA4GH), with the aim to be reliable for production purposes and robust and scalable.
- GA4GH
- Workflow Execution