All software
Cerise
Cerise is a service for running CWL workflows on HPC resources. You add software, tool descriptions, and connection information, then your user runs workflows whenever they want.
- High performance computing
- Optimized data handling
- Workflow technologies
- Common Workflow Language
- Dockerfile
- Makefile
- + 2
CERR
CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics.
- Treatment Planning and dosimetry
- AGS Script
- Batchfile
- C
- + 20
cerulean
A Python 3 library for talking to HPC clusters and supercomputers.
- High performance computing
- SFTP
- SLURM
- + 2
- Dockerfile
- Python
- Shell
CHAMP-EU
The Cornell-Holland Ab-initio Materials Package (CHAMP) is a quantum Monte Carlo suite of programs for electronic structure calculations. The code is developed by Claudia Filippi and Saverio Moroni, with significant contributions by Ravindra Shinde, N. Renaud, V. Azizi, E. Landinez, and S. Shepard.
- Chemistry
- High performance computing
- Physics
- + 1
- Assembly
- Berry
- Brainfuck
- + 14
check-deps
This Python script checks whether a given set of software dependencies is met. This script itself is completely stand-alone and depends only on Python being installed. You may include this script along with a `dependencies.ini` in a project that has a diverse set of dependencies.
- Dependency Hell
- python
- Workflow technologies
- Awk
- CSS
- Makefile
- + 1
CIL
Provides modular optimisation framework for prototyping reconstruction methods. Tools for loading, preprocessing, visualising tomographic data.
- Imaging and Image Processing
- C
- C++
- CMake
- + 2
CIMPredict
CIMPredict delivers an alternative to the FRAX fracture risk calculator for osteoporosis patients based on a new Calcium isotope marker in blood.
- Blue Health Tech
- Data analysis
- Health
- + 2
- Python
- R
Citation File Format
The Citation File Format (CFF) project provides a format and schema for plain text CITATION.cff files with human- and machine-readable citation information for software (and datasets). Developers/RSEs can include them in their repositories to let others know how to correctly cite their software.
- Citation File Format
- Information
- metadata
- + 2
- Python
Cityblocks
Python utility to generate local climate zone (LCZ) tiles for rendering in 3D in QGIS
- Python
- QML
cleanX
CleanX is an open-source python library for exploring, cleaning and augmenting large datasets of X-rays, or certain other types of radiological images.
- Image processing
- Machine learning
- Dockerfile
- Jupyter Notebook
- Python
- + 3
ClimaNet
A Climate Aware Spatio Temporal Encoder Decoder
- Big data
- climate
- deep learning
- Jupyter Notebook
- Python
- Shell
ClinDIG
ClinDIG provides a federated data management and analysis solution for clinical and genomic data while to provide opportunity for distributed analysis centred on protecting patient privacy.
- clinical
- federated
- genomics
- + 1
- CSS
- Dockerfile
- Go Template
- + 5