All software
CDS ToolChain
The CDS ToolChain is being developed as part of the INTERPOLAR project of the Medical Informatics Initiative (MII). The CDS ToolChain is typically used in an MII data integration center (DIZ) and processes FHIR resources that comply with the MII Core Data Set (CDS) specification.
- FHIR
- OpenSource
- R
- PLpgSQL
- Shell
- + 2
Constellation
Control and data acquisition system for small-scale experiments and experimental setup with volatile and dynamic constituents such as test beam environments or laboratory test stands
- DAQ
- DCS - Distributed Control System
- open source
- + 1
- C++
- Python
- Meson
- + 2
DataFlow
A comprehensive framework for automated data processing and manual postprocessing, including quality control and flagging. Modular and extensible design allows to create customizable pipelines and monitor their performance throughout the data lifecycle.
- data managment
- Data Visualization
- Pipeline
- + 2
- TSX
- Python
- TypeScript
- + 2
Digital Mappa
An open-source digital humanities platform for open-access workspaces, projects and publications
- annotation
- Virtual Research Environment
- Web Application
- JavaScript
- Ruby
- HTML
- + 4
ETHOS.GLAES
GLAES is a framework for conducting land eligibility analyses and is designed to easily incorporate disparate geospatial information from a variety of sources into a unified solution.
- ESD
- ESD - Topic 1
- Python
- Dockerfile
flexynesis
A deep-learning based multi-omics sequencing data integration suite
- Python
- Scheme
- Dockerfile
FlowStrider
FlowStrider automates data flow-based threat modeling
- threat modeling
- Python
- Dockerfile
FSQC
This package provides quality assurance / quality control scripts for FastSurfer- or FreeSurfer-processed structural MRI data.
- Data analysis
- MRI
- Neuroimaging
- + 2
- Python
- Dockerfile
ETHOS.HiSim - Household Infrastructure and Building Simulator
ETHOS.HiSim is a Python package for simulation and analysis of household scenarios and building systems using modern components as alternative to fossil fuel based ones. This package integrates load profiles generation of electricity consumption, heating demand, electricity generation.
- ESD
- ESD - Topic 1
- Modeling
- + 2
- Python
- Jupyter Notebook
- TeX
- + 3
InteractiveVis
The InteractiveVis software framework provides a blueprint for evaluating 3D datasets with convolutional neural networks (CNNs), and for deriving and visualizing CNN relevance maps. This tool was developed and tested for disease detection in MRI scans. We plan to extend it to other domains.
- Data Visualization
- MRI
- open source
- + 1
- Jupyter Notebook
- HTML
- MATLAB
- + 5
JupyterHub Outpost
JupyterHub Outpost can be used as an additional, external source to start and manage single-user servers. Like in JupyterHub itself, different Spawners can be configured at the Outpost. It's best used together with the jupyterhub-outpostspawner configured at JupyterHub.
- Jupyter
- Kubernetes
- python
- Python
- Shell
- Dockerfile
LightHouse
LightHouse helps to navigate the wild and complex sea of OpenID Federation. LightHouse is a flexible and configurable OpenID Federation Entity, and can be used as a Trust Anchor / Intermediate Authority / Resolver / Trust Mark Issuer or everything at the same time.
- OIDC
- oidfed
- OpenID Connect
- + 1
- Go
- Dockerfile
- Shell