All software

dCache

dCache is a system for storing and retrieving huge amounts of scientific data, distributed among a large number of heterogeneous server nodes, under a single virtual filesystem tree with a variety of standard access methods including NFSv4.1 (pNFS), FTP, WebDav and xroot.

eXist-db

eXist-db is a high-performance open source native XML database – a NoSQL document database and application platform built entirely around XML technologies.

PeriHub

PeriHub is a platform that provides a numerical implementation of the peridynamic theory. It is an extension of the open source Peridigm software. Peridynamics is a non-local theory that overcomes discontinuity problems of the classical theory of continuum mechanics.

Trimmomatic

Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.

wps-command-line-tool-repository

A wrapper framework around the WPS 4.0 server by 52° North to allow easy integration of command line scripts into WPS services.

Apatosaurus

Apatosaurus is a web app for creating, editing, visualizing, and analyzing a digital critical apparatus.

Arethusa

A backend-independent client-side annotation framework designed to: Make annotating accessible and enjoyable, lowering the entry barrier for the user by providing access to related resources and services at the point of annotation. Make the develop

Autodone

Autodone is a service for the automated, time-controlled publication of status updates on any Mastodon instance. The codebase is developed under a free license by the Department of Digital Humanities at the University of Cologne and is open to all interested users.

base-repo

Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.

CATMA (Computer Assisted Text Markup and Analysis)

CATMA is a practical and intuitive tool for literary scholars, students and other parties with an interest in text analysis and literary research. By helping perform many of the procedures useful for literary analysis that normally have to be carried out entirely manually.

CDS ToolChain

The CDS ToolChain is being developed as part of the INTERPOLAR project of the Medical Informatics Initiative (MII). The CDS ToolChain is typically used in an MII data integration center (DIZ) and processes FHIR resources that comply with the MII Core Data Set (CDS) specification.

Computer Vision Experimentation Frameworks - Generalized-YOLOv5