All software
Constellation
Control and data acquisition system for small-scale experiments and experimental setup with volatile and dynamic constituents such as test beam environments or laboratory test stands
- DAQ
- DCS - Distributed Control System
- Matter
- + 2
- C++
- Python
- Meson
- + 2
dCache
dCache is a system for storing and retrieving huge amounts of scientific data, distributed among a large number of heterogeneous server nodes, under a single virtual filesystem tree with a variety of standard access methods including NFSv4.1 (pNFS), FTP, WebDav and xroot.
- data managment
- FAIR Data
- Java
- HTML
- JavaScript
- + 14
eXist-db
eXist-db is a high-performance open source native XML database – a NoSQL document database and application platform built entirely around XML technologies.
- NoSQL
- open source
- XML
- Java
- XQuery
- GAP
- + 11
PeriHub
PeriHub is a platform that provides a numerical implementation of the peridynamic theory. It is an extension of the open source Peridigm software. Peridynamics is a non-local theory that overcomes discontinuity problems of the classical theory of continuum mechanics.
- Data Visualization
- High performance computing
- Modelling
- + 2
- Python
- Vue
- TypeScript
- + 7
quinex
quinex automates the large-scale extraction of quantitative information from text across many domains using lightweight and open language models
- information extraction
- Large Language Model (LLM)
- Measurement Extraction
- + 4
- Python
- TypeScript
- Shell
- + 3
Trimmomatic
Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.
- Earth & Environment
- Illumina
- NGS
- Java
- Dockerfile
wps-command-line-tool-repository
A wrapper framework around the WPS 4.0 server by 52° North to allow easy integration of command line scripts into WPS services.
- Earth & Environment
- Remote Procedure Calls
- Web Processing Service
- Java
- Scheme
- Python
- + 3
AMPBA-workflow
AMPBA is a modular, Snakemake-based pipeline for reproducible amplicon metabarcoding, composable across markers and study designs, and lightweight enough to run independently on hardware from laptops to HPC clusters.
- Python
- Snakemake
- Shell
- + 2
Apatosaurus
Apatosaurus is a web app for creating, editing, visualizing, and analyzing a digital critical apparatus.
- htmx
- Textual Criticism
- TypeScript
- Svelte
- Python
- + 4
Arethusa
A backend-independent client-side annotation framework designed to: Make annotating accessible and enjoyable, lowering the entry barrier for the user by providing access to related resources and services at the point of annotation. Make the develop
- annotation
- JavaScript
- HTML
- SCSS
- + 3
Autodone
Autodone is a service for the automated, time-controlled publication of status updates on any Mastodon instance. The codebase is developed under a free license by the Department of Digital Humanities at the University of Cologne and is open to all interested users.
- Dissemination
- open source
- Outreach
- + 1
- Java
- HTML
- Dockerfile
base-repo
Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.
- Datacite
- data managment
- FAIR Data
- + 1
- Java
- Shell
- Dockerfile