All software
AROSICS
AROSICS is an automated and robust open-source image co-registration software for multi-sensor satellite data.
- Earth & Environment
- Fourier Shift Theorem
- Geometric Pre-processing
- + 8
- Python
- Makefile
- Shell
FastSurfer
FastSurfer is a fast and accurate deep-learning pipeline for the analysis of human brain MRI. FastSurfer provides a fully compatible FreeSurfer alternative for volumetric and surface-based thickness analysis, also supporting sub-mm resolutions, and sub-segmentation of neuroanatomical structures.
- Data analysis
- Deep Learning
- Image processing
- + 3
- Python
- Jupyter Notebook
- Shell
- + 1
MIRP
MIRP is a python package for quantitative analysis of medical images. It focuses on processing images for integration with radiomics workflows. These workflows either use quantitative features computed using MIRP, or directly use MIRP to process images as input for deep learning models.
- Medical Image Processing
- python
- radiomics
- Python
- Jupyter Notebook
- R
- + 2
AMIRIS
AMIRIS is the open Agent-based Market model for the Investigation of Renewable and Integrated energy Systems. It aims at enabling scientists to dissect the complex questions arising with respect to future energy markets, their market design, and energy-related policy instruments.
- Agent-based Model
- electricity
- Energy
- + 4
- Java
- Python
- BibTeX
Materials Learning Algorithms
MALA (Materials Learning Algorithms) is a data-driven framework to accelerate electronic structure calculations based on machine learning. Its purpose is to construct neural-network surrogate models for bypassing computationally expensive steps in state-of-the-art density functional simulations.
- Density functional theory
- electronic structure
- machine-learning
- + 2
- Python
- Fortran
- Shell
- + 1
CoMOLA
CoMOLA is a python tool for optimal spatial allocation of land uses. The tool creates optimal land-use maps for up to four objectives. It takes into account constraints and can be coupled with external models to evaluate different objectives (e.g. ecosystem services/biodiversity models)
- land-use allocation
- multi-objective optimization
- NSGA-II
- Python
- R
FlexiGIS
FlexiGIS is a software tool for processing and analysing GIS-based data to design urban energy systems. Models developed with FlexiGIS enable the exploration and assessment of flexibility options in cities.
- Data analysis
- Energy
- Energy planning
- + 4
- Python
- Makefile
GSTools
GSTools is a Python-based software suite for solving a wide range of geostatistical problems. GSTools provides methods for generating different classes of correlated random fields; it can perform kriging, variogram estimation and much more.
- covariance-model
- geospatial
- geostatistics
- + 7
- Python
CellDetection
An open-source Python package, offering advanced AI methods for the identification and segmentation of biomedical objects, such as cells, in image data. Includes trained models that work out-of-the-box for a wide range of use cases.
- cell counting
- cell detection
- cell segmentation
- + 9
- Python
- Dockerfile
pycomlink
A python toolbox for deriving rainfall information from commercial microwave link (CML) data.
- precipitation estimation
- python
- rainfall
- + 2
- Python
GOLEM
GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework
- Earth & Environment
- Multiphysics of porous fractured rocks
- reservoir behaviour and induced seismicity
- + 1
- C++
- SWIG
- Assembly
- + 5
SpatialData framework
SpatialData is an open and interoperable data framework for ingesting, representing, processing and visualizing spatial omics datasets.
- Data Visualization
- FAIR Data
- Multi omics
- + 3
- Python
- Dockerfile