All software
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- CSS
- Dockerfile
- Go
- + 5
Helmholtz Research Software Directory
The Helmholtz Research Software Directory is a place to discover and promote research software. Designed for Research Software Engineers and Scientists, it aims to foster FAIR and reuseability of software.
- FAIR Software
- TSX
- TypeScript
- PLpgSQL
- + 2
howfairis
Command line tool to analyze a git repository's compliance with the fair-software.eu recommendations.
- Dockerfile
- HTML
- Python
- + 1
LARA Lab Automation
Open source toolset for lab automation
- laboratory automatization
- CSS
- Dockerfile
- HTML
- + 5
LUE
LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.
- Agent-based modeling
- environmental modelling
- field based modelling
- + 6
- Batchfile
- C
- C++
- + 6
microGWAS
microGWAS is a snakemake-powered pipeline to carry out an end-to-end microbial GWAS analysis. Starting from genome assemblies and a phenotype file, microGWAS will run a number of associations using pyseer, annotate the associations results, and generating a number of functional enrichment tests.
- GWAS
- mGWAS
- Pipeline
- + 2
- Python
- Shell
- R
Noodles
Task-based parallel programming model in Python that offers the same intuitive interface when running complex workflows on your laptop or on large computer clusters.
- High performance computing
- Workflow technologies
- HTML
- Jupyter Notebook
- Lua
- + 2
Hercules
Retrieve recent tweets from certain users and classify them with machine learning
- Machine learning
- Text analysis & natural language processing
- Jupyter Notebook
- Python
- Shell
stream2segment
A Python library and command line application to download, process and visualize event-based seismic waveform segments, specifically designed to manage big volumes of data
- Big data
- data managment
- Data Visualization
- + 5
- Python
- Jupyter Notebook
- HTML
- + 1
TomoBEAR
TomoBEAR is an open-source configurable and customizable modular pipeline for streamlined and parallelized processing of large-scale cryo-electron tomography data for subtomogram averaging.
- Alignment
- automated reasoning
- cluster
- + 16
- MATLAB
- M
- Python
- + 1
ToxTempAssistant
LLM-based web-app to assist users in drafting ToxTemp, a template for describing in-vitro toxicity test methods in compliance with GD211.
- metadata
- Dockerfile
- HTML
- JavaScript
- + 4
Code supporting the publication: Towards Backdoor Stealthiness in Model Parameter Space.
Code supporting the publication: Towards Backdoor Stealthiness in Model Parameter Space.
- backdoor attack
- computer vision
- Convolutional neural networks
- + 4
- Markdown
- Other
- Python