All software
Arbor
Arbor is a high-performance library for computational neuroscience simulations with multi-compartment, morphologically-detailed cells, from single cell models to very large networks. Arbor is written from the ground up to help neuroscientists effectively use contemporary and future HPC systems.
- GPU
- High performance computing
- Neural network
- + 4
- C++
- AGS Script
- Python
- + 7
Arcmira: YouTube Transcript Search
Search indexed YouTube transcripts for timestamped quotes, speaker appearances, mentions and recommendations.
- transcript search
- YouTube
- JavaScript
- Python
- Shell
- + 1
Arctic Web Map
Arctic Web Map (AWM) is an Arctic-specific web mapping tool allowing researchers to customize map projections for scientifically accurate visualization and analysis, a function that is critical for arctic research but missing in existing web mapping platforms.
- data collection
- python
- wildlife
- CSS
- JavaScript
- Python
- + 1
Arethusa
A backend-independent client-side annotation framework designed to: Make annotating accessible and enjoyable, lowering the entry barrier for the user by providing access to related resources and services at the point of annotation. Make the develop
- annotation
- JavaScript
- HTML
- SCSS
- + 3
asrlitcompare
A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.
- ASReview
- inter-rater reliability
- literature screening
- + 1
- AppleScript
- Awk
- Batchfile
- + 14
Axiom-0
Dependency-free Python reference implementation for explicit data contracts, canonicalization, measurable state transitions, KL-divergence checks, validation, and reproducible repository boundaries
- canonical json
- data contracts
- Reproducibility
- + 3
- CSS
- HTML
- JavaScript
- + 3
base-repo
Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.
- Datacite
- data managment
- FAIR Data
- + 1
- Java
- Shell
- Dockerfile
BGC Viewer
A viewer for biosynthetic gene cluster data.
- bioinformatics
- Gene Clusters
- natural products
- + 1
- CSS
- Dockerfile
- HTML
- + 6
bibr
bibliography rodent 🦫 - a modern scientific extraction pipeline.
- Jinja
- Jupyter Notebook
- Python
- + 2
BIOMERO
a scalable and extensible image analysis framework
- biaflows
- bioimaging
- biomero
- + 9
- Dockerfile
- Python
- Shell
c3s-magic-wps
Web Processing Service for Climate Data Analysis in the MAGIC project.
- Dockerfile
- Makefile
- Python
- + 1
Canadian Writing Research Collaboratory (CWRC)
CWRC aims to make digital research methods broadly accessible, and to develop an active community of researchers engaged in exploring the potential of collaboration online.
- Canadian culture & history
- cultural studies
- digital humanities
- + 1
- ActionScript
- Batchfile
- Classic ASP
- + 16