All software

ROE

Designed for patient-specific prescription determination using personalized dose-response curves. Visualizes TCP and NTCP.

ROOT

An open-source data analysis framework used by high energy physics and others.

Rosemary

Rosemary is a plugin for YASGUI (Yet Another SPARQL GUI), facilitating creation of SPARQL queries without requiring knowledge of SPARQL.

rspacer

rspacer is an R package that wraps the RSpace Electronic Lab Notebook (https://www.researchspace.com/) API. It provides convenience functions to browse, search, create, and edit your RSpace documents. In addition, it enables filling RSpace templates using R Markdown/Quarto reports or tabular data.

RTpipeline

RTpipeline is a comprehensive, research-grade pipeline that transforms raw DICOM radiotherapy exports into analysis-ready data. It bridges the technical gap between clinical Treatment Planning Systems (TPS) and statistical/ML analysis

SampleDB

SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.

scPower

scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.

Sentinel

Sentinel is an automated log-file analysis application for Varian linacs (TrueBeam, Halcyon, Edge).

SmartPlay

Android OS Wear Application to measure children's activity when playing.

SMECS _ software metadata extraction and curation software

A web application to extract and curate research software metadata following the CodeMeta software metadata standard.

SNIK Graph

SOCYVIA

Scientific experimentation environment for computational social science, connecting study design, experimental content, participant experience, behavioral data, analysis, and reproducible research workflows.