All software
ROOT
An open-source data analysis framework used by high energy physics and others.
- AppleScript
- Assembly
- Batchfile
- + 28
Rosemary
Rosemary is a plugin for YASGUI (Yet Another SPARQL GUI), facilitating creation of SPARQL queries without requiring knowledge of SPARQL.
- Data
- database
- Data management
- + 10
- CSS
- Dockerfile
- HTML
- + 1
SampleDB
SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.
- Electronic Lab Notebook
- metadata
- Research Data Management
- Python
- HTML
- JavaScript
- + 3
Schema Studio
Schema Studio is an open-source visual platform for creating, validating, previewing, versioning, and publishing JSON Schema-based metadata models for FAIR research data.
- controlled vocabularies
- dynamic forms
- FAIR Data
- + 18
- TSX
- TypeScript
- Python
- + 2
scPower
scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.
- Experimental design
- Health
- scRNA-seq
- + 1
- R
- HTML
- CSS
Scripto
Scripto is an extension for Omeka Classic and Omeka S, that opens up the possibilities of community-sourced transcription, translation, or description for digital humanities projects.
- crowdsourcing
- Transcription
- PHP
- Ruby
- JavaScript
- + 1
SigmaCV
Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus) — free for individuals, open-source, FAIR by design.
- academic CV
- bibliometrics
- CSL
- + 6
- CSS
- Dockerfile
- JavaScript
- + 5
Slurm time on Jupyter
Display Slurm job remaining time in Jupyter top bar
- High performance computing
- jupyter notebooks
- SLURM
- CSS
- JavaScript
- Python
- + 1
Smithsonian Voyager
Open source 3D explorer and authoring tool suite.
- CSS
- Dockerfile
- GLSL
- + 5
SNIK Graph
- hospital information system
- information management
- linked data
- + 1
- TypeScript
- HTML
- TeX
- + 3
SOCYVIA
Scientific experimentation environment for computational social science, connecting study design, experimental content, participant experience, behavioral data, analysis, and reproducible research workflows.
- Arabic research software
- behavioral data
- behavioral research
- + 12
- C#
- CSS
- HTML
- + 4
spirit
Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.
- Atomistic Spin Dynamics
- C++
- CUDA
- + 5
- C++
- Python
- CMake
- + 9