All software
RTpipeline
RTpipeline is a comprehensive, research-grade pipeline that transforms raw DICOM radiotherapy exports into analysis-ready data. It bridges the technical gap between clinical Treatment Planning Systems (TPS) and statistical/ML analysis
- Clinical workflow and applications
- Dockerfile
- HTML
- Jupyter Notebook
- + 2
SampleDB
SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.
- Electronic Lab Notebook
- metadata
- Research Data Management
- Python
- HTML
- JavaScript
- + 3
docker sandbox templates
Enhanced docker sandbox templates for using AI agents in a secure vm-based sandbox
- AI agent
- docker
- LLM security
- + 2
- Dockerfile
- HCL
- Makefile
- + 1
Schema Studio
Schema Studio is an open-source visual platform for creating, validating, previewing, versioning, and publishing JSON Schema-based metadata models for FAIR research data.
- controlled vocabularies
- dynamic forms
- FAIR Data
- + 18
- TSX
- TypeScript
- Python
- + 2
Sensor Management System
The Sensor Management System (SMS) allows the comprehensive acquisition, administration and export of meta data of platforms, sensors and measurement configurations by stations and campaigns operated in the Helmholtz research field Earth & Environment.
- catalogue
- data managment
- Earth & Environment
- + 4
- Python
- Vue
- TypeScript
- + 2
SFINCS-BMI-server
grpc4bmi wrapper around Delteras/sfincs BMI for use with eWaterCycle
- C++
- CMake
- Dockerfile
- + 1
SigmaCV
Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus) — free for individuals, open-source, FAIR by design.
- academic CV
- bibliometrics
- CSL
- + 6
- CSS
- Dockerfile
- JavaScript
- + 5
SMASH - A hadronic transport approach
SMASH is a relativistic hadronic transport approach for the dynamical description of heavy-ion reactions. It is a microscopic non-equilibrium approach and incorporates all well known hadronic states and their interactions.
- CPU
- Matter
- open source
- + 1
- C++
- CMake
- Shell
- + 3
SMECS _ software metadata extraction and curation software
A web application to extract and curate research software metadata following the CodeMeta software metadata standard.
- Python
- HTML
- Dockerfile
- + 1
Smithsonian Voyager
Open source 3D explorer and authoring tool suite.
- CSS
- Dockerfile
- GLSL
- + 5
SNIK Graph
- hospital information system
- information management
- linked data
- + 1
- TypeScript
- HTML
- TeX
- + 3
spirit
Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.
- Atomistic Spin Dynamics
- C++
- CUDA
- + 5
- C++
- Python
- CMake
- + 9