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Logo for CADET
@helmholtz.software

CADET

CADET provides hierarchical models, efficient solvers and computational engineering tools for a range of biotechnological processes, including chromatography, filtration, crystallization, and fermentation.

  • adsorption
  • chromatography
  • compartment modelling
  • + 4
  • C++
  • CMake
  • C
  • + 5
15
347
Logo for Earth System Model Evaluation Tool (ESMValTool)
@helmholtz.software

Earth System Model Evaluation Tool (ESMValTool)

  • climate modelling
  • Data analysis
  • Earth & Environment
  • + 4
  • Python
  • NCL
  • R
  • + 7
89
327
Logo for 4C Multiphysics
@helmholtz.software

4C Multiphysics

4C is a parallel multiphysics research code for simulating solid/fluid mechanics, scalar transport, and chemical reactions. It supports both single-field and coupled systems, offering ready-to-use solutions for a wide range of physical problems.

  • Computational Fluid Dynamics
  • High performance computing
  • Information
  • + 3
  • C++
  • CMake
  • Python
  • + 6
0
284
Logo for NetworKit
@helmholtz.software

NetworKit

NetworKit is a growing open-source toolkit for large-scale network analysis. Its aim is to provide tools for the analysis of large networks in the size range from thousands to billions of edges. It implements efficient graph algorithms, many of them parallel to utilize multicore architectures.

  • algorithm engineering
  • Graph algorithms
  • Network Analysis
  • C++
  • Cython
  • Python
  • + 9
0
265
Logo for FastSurfer
@helmholtz.software

FastSurfer

FastSurfer is a fast and accurate deep-learning pipeline for the analysis of human brain MRI. FastSurfer provides a fully compatible FreeSurfer alternative for volumetric and surface-based thickness analysis, also supporting sub-mm resolutions, and sub-segmentation of neuroanatomical structures.

  • Data analysis
  • Deep Learning
  • Image processing
  • + 3
  • Python
  • Shell
  • Jupyter Notebook
  • + 1
10
259
Logo for Materials Learning Algorithms
@helmholtz.software

Materials Learning Algorithms

MALA (Materials Learning Algorithms) is a data-driven framework to accelerate electronic structure calculations based on machine learning. Its purpose is to construct neural-network surrogate models for bypassing computationally expensive steps in state-of-the-art density functional simulations.

  • Density functional theory
  • electronic structure
  • machine-learning
  • + 2
  • Python
  • Fortran
  • Shell
  • + 1
28
254
Logo for CellDetection
@helmholtz.software

CellDetection

An open-source Python package, offering advanced AI methods for the identification and segmentation of biomedical objects, such as cells, in image data. Includes trained models that work out-of-the-box for a wide range of use cases.

  • cell counting
  • cell detection
  • cell segmentation
  • + 9
  • Python
  • Dockerfile
1
236
Logo for SAGECal
@research-software-directory.org

SAGECal

Fast, memory efficient and GPU accelerated radio interferometric calibration program

  • Big data
  • GPU
  • High performance computing
  • C
  • C++
  • CMake
  • + 5
4
218
Logo for SpatialData framework
@helmholtz.software

SpatialData framework

SpatialData is an open and interoperable data framework for ingesting, representing, processing and visualizing spatial omics datasets.

  • Data Visualization
  • FAIR Data
  • Multi omics
  • + 3
  • Python
  • Dockerfile
13
216
Logo for ESMValCore
@research-software-directory.org

ESMValCore

ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • Dockerfile
  • HTML
  • JavaScript
  • + 4
55
163
Logo for Multiphase Code Repository by HZDR for OpenFOAM Foundation Software
@helmholtz.software

Multiphase Code Repository by HZDR for OpenFOAM Foundation Software

The Multiphase Code Repository by HZDR provides research code based on OpenFOAM Foundation Software for simulating multiphase flows. Its focus is MultiMorph, an morphology-adaptive Euler-Euler model, supported by validation cases and workflows for robust industrial applications.

  • Computational Fluid Dynamics
  • Energy
  • Euler-Euler method
  • + 5
  • C++
  • Shell
  • Lex
  • + 2
19
160
@research-software-directory.org

FAIR Data Point

RESTful web service that enables data owners to expose their data sets using rich machine-readable metadata.

  • Big data
  • Inter-operability & linked data
  • Dockerfile
  • Makefile
  • Python
6
153