All software
SicHash
A perfect hash function is a function that has no collisions on a given set. SicHash places objects in a cuckoo hash table and then stores the final hash function choice of each object in a retrieval data structure. Using irregular cuckoo hashing, each object has a different number of hash functions
- C++
- TeX
- Shell
- + 2
TomoBEAR
TomoBEAR is an open-source configurable and customizable modular pipeline for streamlined and parallelized processing of large-scale cryo-electron tomography data for subtomogram averaging.
- Alignment
- automated reasoning
- cluster
- + 16
- MATLAB
- M
- Python
- + 1
ToxTempAssistant
LLM-based web-app to assist users in drafting ToxTemp, a template for describing in-vitro toxicity test methods in compliance with GD211.
- metadata
- Dockerfile
- HTML
- JavaScript
- + 4
Data underlying the publication/thesis chapter: Scale Learning in Scale-Equivariant Convolutional Networks
Data underlying the publication/thesis chapter: Scale Learning in Scale-Equivariant Convolutional Networks
- computer vision
- Convolutional neural network (CNN)
- equivariance
- + 3
- JSON
- Jupyter Notebook
- Markdown
- + 5
PETsChallenge
Code underlying: Privacy-Preserving Membership Queries for Federated Anomaly Detection
- Anomaly detection
- cryptography
- elliptic curves
- + 4
- HTML
- Markdown
- Other
- + 4
atoMEC
atoMEC is a python-based average-atom code for simulations of high energy density phenomena such as in warm dense matter. It is designed as an open-source and modular python package.
- Matter
- Python
- Shell
chimp-classifier
The Python package `junglesounds` is a machine learning pipeline for classifying bioacoustic data using machine learning. The pipeline is reusable for other settings and species or vocalization types as long as a certain amount of labeled data has been collected.
- audio
- Audio processing
- bioacoustics
- + 2
- Jupyter Notebook
- Python
- Shell
Climate Rapid Evaluation Framework
Rapid Evaluation Framework for climate simulations
- Big data
- Climate modeling
- CSS
- Dockerfile
- Go Template
- + 6
Emma
Emma is a project to create a platform for development of application for Spark and DockerSwarm clusters.
- Big data
- Python
- R
- Scala
- + 1
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- Blade
- Dockerfile
- HTML
- + 7
Lilio
A Python package for generating calendars to resample timeseries into training and target data for machine learning. Named after the inventor of the Gregorian Calendar.
- AI
- Preprocessing
- S2S
- Python
- Shell
s2spy
A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.
- AI
- S2S
- Python
- Shell