All software
cffinit
A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.
- Software Citation
- CSS
- HTML
- JavaScript
- + 3
eAstroViz
This tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR intermediate data products. It also performs RFI mitigation.
- LOFAR
- radio astronomy
- RFI
- C
- C++
- Cuda
- + 3
eCLM
The enCore Community Land Model (eCLM) is based on the Community Land Model version 5, representing land surface processes including hydrology, biogeophysics, biogeochemistry and ecosystem dynamics.
- Biogeochemistry
- Earth System Modelling
- FAIR Software
- + 2
- Fortran
- CMake
- Perl
- + 6
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- CSS
- Dockerfile
- Go
- + 5
howfairis
Command line tool to analyze a git repository's compliance with the fair-software.eu recommendations.
- Dockerfile
- HTML
- Python
- + 1
LARA Lab Automation
Open source toolset for lab automation
- laboratory automatization
- CSS
- Dockerfile
- HTML
- + 5
LUE
LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.
- Agent-based modeling
- environmental modelling
- field based modelling
- + 6
- Batchfile
- C
- C++
- + 6
microGWAS
microGWAS is a snakemake-powered pipeline to carry out an end-to-end microbial GWAS analysis. Starting from genome assemblies and a phenotype file, microGWAS will run a number of associations using pyseer, annotate the associations results, and generating a number of functional enrichment tests.
- GWAS
- mGWAS
- Pipeline
- + 2
- Python
- Shell
- R
MyCoRe
MyCoRe (acronym for My Content Repository) is an open source repository software framework for building disciplinary or institutional repositories, digital archives, digital libraries, and scientific journals.
- CMS
- digital archive
- digital library
- + 3
- Java
- TypeScript
- XSLT
- + 7
Noodles
Task-based parallel programming model in Python that offers the same intuitive interface when running complex workflows on your laptop or on large computer clusters.
- High performance computing
- Workflow technologies
- HTML
- Jupyter Notebook
- Lua
- + 2
Hercules
Retrieve recent tweets from certain users and classify them with machine learning
- Machine learning
- Text analysis & natural language processing
- Jupyter Notebook
- Python
- Shell
ShockHash
A perfect hash function is a function that has no collisions on a given set. ShockHash constructs very compact perfect hash functions significantly faster than previous approaches.
- C++
- CMake
- Shell