All software
SKAO Science Data Challenge 1 Solution Workflow
The SKA Science Data Challenge 1 (SDC1, https://astronomers.skatelescope.org/ska-science-data-challenge-1/) tasked participants with identifying and classifying sources in synthetic radio images. Here we present an environment and workflow for producing a solution to this challenge that can easil...
- astronomy
- Data
- Machine learning
- + 2
- Dockerfile
- Jupyter Notebook
- Makefile
- + 2
ZenodoCI
The library is intended to be part of a complete CI pipeline. This stage deploys to Zenodo the files found in the ./build directory, configured in the .gitlab-ci.yml file
- ESCAPE
- Dockerfile
- Python
- Shell
ewatercycle-wflowjl
Wflow.jl plugin for eWatercycle.
- Dockerfile
- Python
FAIR DO MoMEnT
FDO MoMEnT is a Web app that allows the creation of FAIR Digital Objects (FAIR DO). This is done in a modular way by selecting from a list of templates defining metadata available in the resulting FAIR DO.
- fairdigitalobject
- fairdo
- TypeScript
- HTML
- CSS
- + 2
flexynesis
A deep-learning based multi-omics sequencing data integration suite
- Python
- Scheme
- Dockerfile
FlowStrider
FlowStrider automates data flow-based threat modeling
- threat modeling
- Python
- Dockerfile
Folklore Clinical Variant Interpretation MCP
Folklore MCP 1.5.0: read-only GRCh38 germline variant evidence, ClinGen gene-disease associations and biomedical literature.
- ACMG/AMP
- bioinformatics
- clinical variant interpretation
- + 4
- Dockerfile
- Jupyter Notebook
- Python
- + 1
Forecasting the grid emission factor for the Netherlands
A workflow to produce emission factor forecasts for the electricity mix of the Netherlands, up to 7 days ahead.
- electricity grid
- emission factor
- Forecasting
- + 1
- Dockerfile
- Python
FromThePage
FromThePage is a platform for crowdsourcing the transcription, indexing, OCR correction and translation of hand-written documents.
- Transcription
- Ruby
- Slim
- JavaScript
- + 6
FSQC
This package provides quality assurance / quality control scripts for FastSurfer- or FreeSurfer-processed structural MRI data.
- Data analysis
- MRI
- Neuroimaging
- + 2
- Python
- Dockerfile
German Portal for Medical Research Data (FDPG)
The German Portal for Medical Research Data (FDPG) is a central platform enabling researchers to access routine clinical data and biosamples from German university hospitals, supporting secure, standardized, and transparent cross-centre medical research.
- TypeScript
- JavaScript
- Shell
- + 4
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- C++
- CMake
- Dockerfile
- + 5