All software
OsiriX
Widely used DICOM viewer. Supports 2D, 3D, 4D, 5D viewing.
- Imaging and Image Processing
- ActionScript
- AppleScript
- C
- + 12
oTree Development Environment
A Docker environment for programming against multiple oTree server
- oTree
- Dockerfile
- Makefile
- Shell
Overture Arranger
Data can be messy, let Arranger organize it for you.
- CSS
- HTML
- JavaScript
- + 3
Overture Data Management System
Overture is a collection of open-source, extendable solutions for big-data genomic science that research institutions and individual researchers can use to support their work.
- authentication
- cloud storage
- genomics
- + 2
- Dockerfile
- Java
- Makefile
- + 1
Overture Ego
A stateless authorization and user management service.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- Java
- Makefile
- + 1
Overture Maestro
Organizing your distributed data into one index.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- JavaScript
- Makefile
- + 1
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Dockerfile
- Java
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Batchfile
- Dockerfile
- Go
- + 7
OxyPOM
OxyPOM: a biogeochemical model for Oxygen and Particulate Organic Matter dynamics with detailed temperature sensitivity
- Biogeochemistry
- Hypoxia
- Phytoplankton viral infection
- + 2
- Fortran Free Form
- R
- Shell
- + 2
parareal
This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.
- High performance computing
- Numerical analysis
- CSS
- Dhall
- HTML
- + 5
ParFlow
ParFlow is a parallel, integrated hydrology model that simulates spatially distributed surface and subsurface flow.
- Earth System Modelling
- High performance computing
- Hydrology
- + 2
- C
- Tcl
- Python
- + 17
ParticlePhaseSpace
A set of tools for processing and analysing particle phase space files. Designed for use with Monte Carlo simulations, particularly for proton therapy.
- Treatment Planning and dosimetry
- Batchfile
- Jupyter Notebook
- Makefile
- + 1