All software
nanomesh
Python workflow tool for generating meshes from 2D and 3D microscopy image data
- Image processing
- Visualization
- Workflow technologies
- Jupyter Notebook
- Python
- Shell
- + 1
Noodles
Task-based parallel programming model in Python that offers the same intuitive interface when running complex workflows on your laptop or on large computer clusters.
- High performance computing
- Workflow technologies
- Jupyter Notebook
- Python
- Shell
- + 2
Hercules
Retrieve recent tweets from certain users and classify them with machine learning
- Machine learning
- Text analysis & natural language processing
- Python
- Jupyter Notebook
- Shell
PedPy
PedPy is a Python library for the analysis of pedestrian movement data.
- pedestrian analysis
- pedestrian dynamics
- research software
- Pascal
- Python
- Jupyter Notebook
- + 1
PerfectFit
This is a virtual coach system that coaches users into being more physically active and stop smoking.
- Big data
- health
- JavaScript
- Gherkin
- Shell
SARvey - survey with SAR
Open-source InSAR time series analysis software developed within the project SAR4Infra. SARvey aims to analyze InSAR displacement time series for engineering applications.
- displacement
- engineering
- InSAR
- + 6
- Python
- Makefile
- Shell
TomoBEAR
TomoBEAR is an open-source configurable and customizable modular pipeline for streamlined and parallelized processing of large-scale cryo-electron tomography data for subtomogram averaging.
- Alignment
- automated reasoning
- cluster
- + 16
- MATLAB
- M
- Python
- + 1
atoMEC
atoMEC is a python-based average-atom code for simulations of high energy density phenomena such as in warm dense matter. It is designed as an open-source and modular python package.
- Matter
- Python
- Shell
chimp-classifier
The Python package `junglesounds` is a machine learning pipeline for classifying bioacoustic data using machine learning. The pipeline is reusable for other settings and species or vocalization types as long as a certain amount of labeled data has been collected.
- audio
- Audio processing
- bioacoustics
- + 2
- Jupyter Notebook
- Python
- Shell
Emma
Emma is a project to create a platform for development of application for Spark and DockerSwarm clusters.
- Big data
- Shell
- Scala
- Python
- + 1
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- PHP
- Shell
- Blade
- + 7
Lilio
A Python package for generating calendars to resample timeseries into training and target data for machine learning. Named after the inventor of the Gregorian Calendar.
- AI
- Preprocessing
- S2S
- Python
- Shell