All software
AMIGOpy
Welcome to AMIGOpy (A Medical Image-based Graphical platfOrm - Python)! This is an evolution of the previously developed MATLAB-based software AMIGOBrachy.
- Treatment Planning and dosimetry
- C++
- CSS
- Inno Setup
- + 2
Apatosaurus
Apatosaurus is a web app for creating, editing, visualizing, and analyzing a digital critical apparatus.
- htmx
- Textual Criticism
- TypeScript
- Svelte
- C++
- + 6
Arbor
Arbor is a high-performance library for computational neuroscience simulations with multi-compartment, morphologically-detailed cells, from single cell models to very large networks. Arbor is written from the ground up to help neuroscientists effectively use contemporary and future HPC systems.
- GPU
- High performance computing
- Neural network
- + 4
- C++
- AGS Script
- Python
- + 7
asrlitcompare
A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.
- ASReview
- inter-rater reliability
- literature screening
- + 1
- AppleScript
- Awk
- Batchfile
- + 14
ccglib
The Complex Common GEMM Library (ccglib) provides mixed-precision matrix-matrix multiplication kernels for complex data.
- CUDA
- GPU
- High performance computing
- + 1
- C
- C++
- CMake
- + 3
CERR
CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics.
- Treatment Planning and dosimetry
- AGS Script
- Batchfile
- C
- + 20
CIL
Provides modular optimisation framework for prototyping reconstruction methods. Tools for loading, preprocessing, visualising tomographic data.
- Imaging and Image Processing
- C
- C++
- CMake
- + 2
ClearCanvas
Provides an extensible and robust platform for medical imaging. Software derived from the project is not intended nor licensed for clinical use.
- Software Engineering and Data Infrastructure
- ASP
- C
- C#
- + 7
cobrar
Constraint-based reconstruction and analysis (COBRA) of metabolic networks in R
- Metabolism
- R
- C
- C++
- M4
- + 2
Collatinus
Collatinus is a free, open-source, multi-platform application (Mac, Windows, Ubuntu and Debian GNU/Linux) that is simple to install and easy to use.
- lemmetizer
- morphological analyzer
- JavaScript
- C++
- HTML
- + 4
Compas Toolkit
The Compas Toolkit is a high-performance C++ library offering GPU-accelerated functions for use in quantitative MRI research.
- GPU
- High performance computing
- MRI
- C
- C++
- CMake
- + 4
cuda_memtest
Tests GPU memory for hardware errors and soft errors using NVIDIA's CUDA or AMD's HIP.
- C++
- CUDA
- High performance computing
- + 1
- C++
- CMake
- C
- + 1