All software
Julearn
Julearn aims to provide an easy-to-use but flexible interface to build predictive models with cross-validation (CV) consistent performance estimates. It poses as a solution accessible to domain experts without extensive ML training, enabling them to quickly fit and evaluate ML algorithms.
- Machine learning
- Neuroimaging
- python
- Python
laserchicken
Toolkit for preprocessing and feature calculation of point clouds created using airborne laser scanning
- Big data
- Machine learning
- Python
- Jupyter Notebook
SaQC
A consistent, extensible, easy-to-use tool/framework for reproducible quality control of time series data.
- Data analysis
- Earth & Environment
- Quality control
- + 1
- Python
trip-planning
Code underlying the publication: Dealing with Uncertainty: Understanding the Impact of Prognostic Versus Diagnostic Tasks on Trust and Reliance in Human-AI Decision Making
- Diagnostic
- Empirical Studies
- Human-AI Decision-Making
- + 6
- Other
- JSON
- Python
- + 3
Inseq
Interpretability for sequence generation models 🐛 🔍
- deep learning
- Explainable AI
- generative models
- + 2
- Python
- Makefile
- Dockerfile
TetraX
TetraX is a package for finite-element-method (FEM) micromagnetic modeling with the aim of providing user-friendly and versatile micromagnetic workflows. Among other features, it allows to efficiently calculate spin-wave spectra in different magnetic systems of general geometries.
- finite-element-method
- magnetization dynamics
- micromagnetic modeling
- + 4
- Python
- C
- Cython
argopy
Argopy is a python library dedicated to Argo data access, manipulation and visualisation for standard users as well as Argo experts.
- Data Analysis
- Data processing
- Earth and Environmental Sciences
- + 3
- Python
- CSS
- Shell
- + 1
Arena-Crowds
Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.
- Computer networks
- Networks
- Network Science
- Jupyter Notebook
- Python
DeepRank2
DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.
- Cancer vaccine
- Convolutional Neural Network
- Deep Learning Framework
- + 5
- Python
- Jupyter Notebook
- TeX
- + 1
DIANNA
Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.
- Explainable AI
- Image processing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
CellRank
CellRank is a computational framework to study cellular fate decisions based on various types of single-cell genomics data. CellRank scales to large cell numbers, is fully compatible with the scverse ecosystem, and is easy to use.
- Data analysis
- fate mapping
- fate prediction
- + 7
- Python
Citation File Format
The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.
- FAIR
- Inter-operability & linked data
- Python