All software
ewatercycle-wflowjl
Wflow.jl plugin for eWatercycle.
- Python
- Dockerfile
flexynesis
A deep-learning based multi-omics sequencing data integration suite
- Python
- Scheme
- Dockerfile
FlowStrider
FlowStrider automates data flow-based threat modeling
- threat modeling
- Python
- Dockerfile
Forecasting the grid emission factor for the Netherlands
A workflow to produce emission factor forecasts for the electricity mix of the Netherlands, up to 7 days ahead.
- electricity grid
- emission factor
- Forecasting
- + 1
- Python
- Dockerfile
FSQC
This package provides quality assurance / quality control scripts for FastSurfer- or FreeSurfer-processed structural MRI data.
- Data analysis
- MRI
- Neuroimaging
- + 2
- Python
- Dockerfile
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- Python
- C++
- Dockerfile
- + 5
ETHOS.HiSim - Household Infrastructure and Building Simulator
ETHOS.HiSim is a Python package for simulation and analysis of household scenarios and building systems using modern components as alternative to fossil fuel based ones. This package integrates load profiles generation of electricity consumption, heating demand, electricity generation.
- ESD
- ESD - Topic 1
- Modeling
- + 2
- Python
- Jupyter Notebook
- TeX
- + 3
iBridges
A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers for research software engineers to integrate compute wokflows and data management.
- Data management
- iRODS
- Metadata Management
- + 1
- Python
- Jupyter Notebook
- Dockerfile
- + 2
InteractiveVis
The InteractiveVis software framework provides a blueprint for evaluating 3D datasets with convolutional neural networks (CNNs), and for deriving and visualizing CNN relevance maps. This tool was developed and tested for disease detection in MRI scans. We plan to extend it to other domains.
- Data Visualization
- MRI
- open source
- + 1
- Jupyter Notebook
- HTML
- MATLAB
- + 5
JupyterHub Outpost
JupyterHub Outpost can be used as an additional, external source to start and manage single-user servers. Like in JupyterHub itself, different Spawners can be configured at the Outpost. It's best used together with the jupyterhub-outpostspawner configured at JupyterHub.
- Jupyter
- Kubernetes
- python
- Python
- Shell
- Dockerfile
kunefe
A Python package that helps users run containerized applications on HPC systems
- Agent-based modeling
- Apptainer
- containers
- + 5
- Python
- Shell
- Dockerfile
Laserfarm
Laserfarm: Laserchicken Framework for Applications in Research in Macroecology. Leverage Laserchicken in distributed fashion to use continental scale point cloud datasets for research.
- Python
- Jupyter Notebook
- Dockerfile