All software
Arethusa
A backend-independent client-side annotation framework designed to: Make annotating accessible and enjoyable, lowering the entry barrier for the user by providing access to related resources and services at the point of annotation. Make the develop
- annotation
- JavaScript
- HTML
- SCSS
- + 3
base-repo
Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.
- Datacite
- data managment
- FAIR Data
- + 1
- Java
- Shell
- Dockerfile
case-e
case-e is an open-source electronic case report form (eCRF) system for designing clinical studies and collecting structured research data. It supports configurable forms, validation, role-based access, audit trails, versioning, and portable exports for transparent, FAIR-oriented research workflows.
- BIDS
- Biomedical Ontologies
- Clinical Research
- + 9
- Vue
- Python
- JavaScript
- + 4
CATMA (Computer Assisted Text Markup and Analysis)
CATMA is a practical and intuitive tool for literary scholars, students and other parties with an interest in text analysis and literary research. By helping perform many of the procedures useful for literary analysis that normally have to be carried out entirely manually.
- annotation
- Text Analysis
- Text Markup
- + 1
- Java
- CSS
- SCSS
- + 6
CDS ToolChain
The CDS ToolChain is being developed as part of the INTERPOLAR project of the Medical Informatics Initiative (MII). The CDS ToolChain is typically used in an MII data integration center (DIZ) and processes FHIR resources that comply with the MII Core Data Set (CDS) specification.
- FHIR
- OpenSource
- R
- PLpgSQL
- Shell
- + 2
Continuous Integration of Architectural Performance Models (CIPM)
The CIPM approach keeps source code and architectural performance models consistent during software development and operation.
- Java
- Xtend
- Batchfile
- + 1
cobrar
Constraint-based reconstruction and analysis (COBRA) of metabolic networks in R
- Metabolism
- R
- R
- C++
- M4
- + 2
Collatinus
Collatinus is a free, open-source, multi-platform application (Mac, Windows, Ubuntu and Debian GNU/Linux) that is simple to install and easy to use.
- lemmetizer
- morphological analyzer
- JavaScript
- C++
- HTML
- + 4
Computer Vision Experimentation Frameworks - Generalized-YOLOv5
- biomedical image analysis
- Deep Learning
- natural image analysis
- + 4
- Python
- Shell
- Dockerfile
cuda_memtest
Tests GPU memory for hardware errors and soft errors using NVIDIA's CUDA or AMD's HIP.
- C++
- CUDA
- High performance computing
- + 1
- C++
- CMake
- C
- + 1
cupla
cupla is a simple user interface for the platform-independent parallel kernel acceleration library alpaka. It follows a similar concept as the NVIDIA® CUDA® API by providing a software layer to manage accelerator devices. alpaka is used as a backend for cupla.
- C++
- heterogeneous computing
- High performance computing
- + 3
- C++
- CMake
- Shell
- + 5
CWRC-Writer
An in-browser text markup editor for use by individual scholars and collaborative scholarly editing projects that require a light-weight online editing environment.
- Web Application
- XML
- XML-Editor
- JavaScript
- CSS
- Less
- + 2