All software
Online Transcription Editor (OTE)
Web-based transcription tool
- Transcription
- Transcription Editor
- HTML
- JavaScript
- CSS
- + 2
Openclatura
Openclatura is a deterministic SMILES-to-IUPAC name rule-based generator derived form the IUPAC Blue Book 2013 recommendations.
- Chemistry
- iupac
- open source
- + 2
- Python
- HTML
- Shell
- + 1
OpenSeadragon
An open-source, web-based viewer for high-resolution zoomable images, implemented in pure JavaScript, for desktop and mobile.
- IIIF
- images
- JavaScript
- HTML
- TypeScript
- + 1
Oxygen XML Editor
Oxygen XML Editor is a complete XML development and authoring platform with support for all major XML related standards and technologies.
- cross-platform software
- XML
- XML-Editor
- HTML
- JavaScript
- CSS
- + 1
PHYLIP
PHYLIP is a free package of programs for inferring phylogenies. It is distributed as source code, documentation files, and a number of different types of executables.
- phylogeny
- Stemmatology
- C
- Java
- Shell
- + 5
PiGx
PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.
- HTML
- Python
- R
- + 7
PP
Pixel-Patrol
- Data exploration
- Prevalidation
- QC
- + 1
- Jupyter Notebook
- Python
- JavaScript
- + 3
Pundit
Web annotation made easy With Pundit Annotator you can highlight or comment on any text on the web. It is the perfect tool for your work, research, study. Pundit Annotator also helps you broaden your everyday reading on the web.
- text-annotation
- HTML
- JavaScript
- TypeScript
- + 3
Pyrrha
Pyrrha is a simple Python Flask WebApp to fasten the post-correction of lemmatized and morpho-syntactic tagged corpora.
- lemmatisation
- Python
- JavaScript
- HTML
- + 4
Research Software Directory
The Research Software Directory is a content management system that is tailored to research software.
- Python
- HTML
- JavaScript
- + 5
RO Crate Java
A Java library to create and modify RO-Crates. The aim of this implementation is to not require too deep knowledge of the specification, and avoiding crates which do not fully comply to the specification, at the same time.
- data managment
- FAIR Data
- FAIR Software
- + 3
- Java
- HTML
- FreeMarker
- + 1
SampleDB
SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.
- Electronic Lab Notebook
- metadata
- Research Data Management
- Python
- HTML
- JavaScript
- + 3