All software
supervillain
supervillain does Markov-Chain Monte Carlo for modified Villain constructions of quantum field theory.
- computational physics
- Monte Carlo simulation
- Physics
- + 2
- Python
- TeX
- Makefile
- + 2
Tilburg University Coding Café
Materials for Tilburg University's Coding Café
- community
- learning materials
- presentation
- + 3
trex2champ
trex2champ is a tool that allows reading output files of quantum chemistry codes (GAMESS and trexio files) and writing input files for CHAMP in V3.0 format.
- Inter-operability & linked data
- python
- Python
Tweet_collector
This project is aimed to help researchers to use Academic Research product track to collect tweets of their interest and analyze them.
- collect tweet
- python
- search tweet
- + 1
- Python
ukis-csmask
UKIS Cloud Shadow MASK (ukis-csmask) package masks clouds and cloud shadows in Sentinel-2, Landsat-9, Landsat-8, Landsat-7 and Landsat-5 images. Masking is performed with a pre-trained convolution neural network. It is fast and works directly on Level-1C data (no atmospheric correction required).
- Earth & Environment
- Image processing
- python
- + 1
- Python
UNHUDDLE
Neighborhood-aware signal reallocation and normalization for multiplex spatial proteomics.
- AnnData
- imaging mass cytometry
- multiplex proteomics
- + 3
- Python
- TeX
UniHarmony
UniHarmony is a sklearn-inspired open-source Python library that aims to implement state-of-the-art data harmonization methods in a unified, standardized language, with extensive documentation and several use-case examples.
- Data analysis
- Image processing
- Machine learning
- + 2
- Python
- Just
- Shell
UTILE-Oxy
Automated workflow using deep learning for the analysis of videos containing oxygen bubbles in PEM electrolyzers: 1. preparing annotated dataset and training models to conduct semantic seg- mentation of bubbles and 2. automating the extraction of bubble properties for further distribution analysis.
- bubbles
- Data analysis
- Data Visualization
- + 7
- Python
- Jupyter Notebook
Verbroken Verbinding NOA conversation survey
As part of our project Verbroken Verbinding we developed a conversation survey. This an AI-driven conversation with respondents. Contrary to conventional surveys, this method enables more detailed insights in the motivations behind answers to survey items.
- conversational survey
- java script
- python
- + 1
Verticox+
Verticox+ is a Cox proportional hazards algorithm for vertically distributed data. The solution is based on the Verticox algorithm from Dai et al., 2022. It has been adapted to be used within the Vantage6 framework.
- federated learning
- Java
- privacy preservation
- + 3
- Dockerfile
- Java
- Jinja
- + 4
VoxTell
VoxTell is a vision–language model for text-driven 3D medical image segmentation, enabling analysis of anatomical structures and pathologies across CT, MRI, and PET, including open-set and clinically described targets beyond predefined label sets.
- Health
- Image processing
- Machine learning
- + 2
- Python
Winnow
Confidence control and FDR estimation for de novo peptide sequencing
- Machine learning
- mass spectrometry
- python
- Dockerfile
- Makefile
- Python
- + 1